Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01362 ATGGCTGCAAATGAAGATGCTGCTGCACAGGAATTTGCACCAAAGAAGAAGCCACCTACAGAGGATGAGAAGAGGAAGAAGAAAATTGTGCCCGGGAGTTTGATGAAAGCTTTGATGAGGCCTGGTGGGGGTGATGCTGGACCTTCAGATGGTGACCAGATTATCTATCACTGCACTATTCGAACTTTGGATGGAGTACTTGTGGAATCTACCAGATCAGATTATGGAGGCAAGGGCATCCCTATAAGACATGTTTTGGGCAAAAGCAAGATGTTATTGGGATTGCTAGAAGGAATTCCATCAATGTTGAAGGGCGAAGTGGCAATGTTCAAGATGAAGCCTCAGTTGCATTATGGTGAGGATGACTGTCCTGTTTCTGCTCCTGATGGTTTTCCTAAAGATGATGAACTTCATTTCGAAGTTGAGCTGATAGAATTTTTCAAAGCCAAGGTTGTTACTGATGATTTGGGAGTTGTAAAAAAGGTAGTACGTGAAGGGCAGGGCTGGGAATCTCCAAGAGAACCTTATGAAGTGAAGGCTTGGATTTCAGCAAAGACAGTTACTGGGAAATTGATCATGTCACATACGGAAGGAGAACCATACTTCTTTACATTTGGAAAATCAGAGTTACCTAAAGGCCTTGAAATGGCGATAGGAACAATGGTTCGGGAAGAGAAGGCTGCTATATATGTCACCAGTCAGTATTTAACTGAGTCTCCTCTGATGCCTGTAATAGAAGGTTATGATGAAGTCCATTTTGAAGTGGAGCTGGTTCACTTTATTCAGGTGAGGGACATGCTTGGAGATGGGCGCCTAATAAAACGCCGAATTCGTGATGGGAAAGGTGATTTTCCAATGGATTGTCCCCTTCATGACAGTCAGCTTCGCGTTCATTACAAGGGTACTGTTCTCGATGAAGAAAAGAGGGTATTCTATGATACAAGGGTAGACAATGATGGTCAGCCATTGGAGTTCTGTTCTGGAGAAGGGCTTGTACCAGAGGGATTTGAAATGAGTGTTCGTCTGATGCTTCCTGGAGAGATAGCTCTTGTCACATGCCCTCCTGACTATGCTTATGATAAGTTTCTAAGGCCTGTAAATGTCCCTGAGGGTGCTCACATTCAGTGGGAAATTGAGCTTCTAGGATTTGAAACGCCAAAGGACTGGACTGGATTGGACTTTAAAAGCATAATGAATGAAGCTGAAAACATCAGAAATACGGGTAACAGGCTGTTCAAAGAAGGAAAATATGAACTTGCCAAGGCCAAGTATGAAAAGGTGCTTCGAGAATTTAATCATGTTAATCCACAAGACGACGAAGAAGGAAAATTTTTGCAGACACACAATTTGCTACACTTGAATGTTGCTGCATGCCATCTAAAATTGGGAGAATGCAAAAAGTCCATTGAGACTTGCAATAAGGTTTTGGAAGCAAATCCTGCACATGTCAAGGGTCTTTATCGTCGTGGAATGGCCTACATGGCTGCTGGAGATTTTGAAGAAGCAAGGGCTGATTTCAAAATGATGATTAAAGTTGACAAGTCAACTGAATCAGATGCAACTGCAGCTCTTCAAAAACTGAAGCAGAAGGAGCAGGAAGTTGAGAAGAAAGCTAGGAAACAATTTAAAGGGCTATTTGACAAGAAGCCTGGAGAAATTGCAGAAGCTAAAGCTGATGAAGATGGAGATCAGATCACAAGTGAAAGCCAGAAGGATGATGAAGTTCATGGGGACTCTGATGGAACATATTCAGAGGATTCACATGAAGCTCCACCCGAGGCACGTCGAACGGGTTGGTTTTATGATTCAGAGGAGTTAAAAGTGAAAGTTTTGGTAATTTTTACTGGTATGTATGAACGTGTTTGTAGCATCTCAATCACTGTTGAGCTTCTACTTTCTGTGCCACAGCCAACGAAATATTAA 1923 0.4243 MAANEDAAAQEFAPKKKPPTEDEKRKKKIVPGSLMKALMRPGGGDAGPSDGDQIIYHCTIRTLDGVLVESTRSDYGGKGIPIRHVLGKSKMLLGLLEGIPSMLKGEVAMFKMKPQLHYGEDDCPVSAPDGFPKDDELHFEVELIEFFKAKVVTDDLGVVKKVVREGQGWESPREPYEVKAWISAKTVTGKLIMSHTEGEPYFFTFGKSELPKGLEMAIGTMVREEKAAIYVTSQYLTESPLMPVIEGYDEVHFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSQLRVHYKGTVLDEEKRVFYDTRVDNDGQPLEFCSGEGLVPEGFEMSVRLMLPGEIALVTCPPDYAYDKFLRPVNVPEGAHIQWEIELLGFETPKDWTGLDFKSIMNEAENIRNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKFLQTHNLLHLNVAACHLKLGECKKSIETCNKVLEANPAHVKGLYRRGMAYMAAGDFEEARADFKMMIKVDKSTESDATAALQKLKQKEQEVEKKARKQFKGLFDKKPGEIAEAKADEDGDQITSESQKDDEVHGDSDGTYSEDSHEAPPEARRTGWFYDSEELKVKVLVIFTGMYERVCSISITVELLLSVPQPTKY 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01362 640 Gene3D - 1 149 IPR046357 GO:0003755
Pumo7g01362 640 FunFam Peptidylprolyl isomerase 262 386 - -
Pumo7g01362 640 SUPERFAMILY FKBP-like 21 150 - -
Pumo7g01362 640 SUPERFAMILY FKBP-like 152 260 - -
Pumo7g01362 640 SUPERFAMILY TPR-like 398 539 IPR011990 GO:0005515
Pumo7g01362 640 Gene3D - 150 261 IPR046357 GO:0003755
Pumo7g01362 640 FunFam Peptidylprolyl isomerase 151 261 - -
Pumo7g01362 640 SUPERFAMILY FKBP-like 266 390 - -
Pumo7g01362 640 FunFam Peptidylprolyl isomerase 389 544 - -
Pumo7g01362 640 SMART tpr_5 401 434 IPR019734 GO:0005515
Pumo7g01362 640 SMART tpr_5 449 482 IPR019734 GO:0005515
Pumo7g01362 640 SMART tpr_5 483 516 IPR019734 GO:0005515
Pumo7g01362 640 MobiDBLite consensus disorder prediction 1 29 - -
Pumo7g01362 640 FunFam Peptidylprolyl isomerase 8 150 - -
Pumo7g01362 640 MobiDBLite consensus disorder prediction 10 29 - -
Pumo7g01362 640 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 51 147 IPR001179 GO:0003755
Pumo7g01362 640 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 150 262 - -
Pumo7g01362 640 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 292 384 IPR001179 GO:0003755
Pumo7g01362 640 MobiDBLite consensus disorder prediction 553 596 - -
Pumo7g01362 640 Pfam Tetratricopeptide repeat 484 512 IPR013105 -
Pumo7g01362 640 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 174 258 IPR001179 GO:0003755
Pumo7g01362 640 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 144 IPR001179 GO:0003755
Pumo7g01362 640 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 293 381 IPR001179 GO:0003755
Pumo7g01362 640 Coils Coil 517 540 - -
Pumo7g01362 640 ProSiteProfiles TPR repeat profile. 483 516 IPR019734 GO:0005515
Pumo7g01362 640 Gene3D - 262 383 IPR046357 GO:0003755
Pumo7g01362 640 Gene3D Tetratricopeptide repeat domain 395 548 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01362 Pumo-Chr7 33900082 33952280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01362 28 548 Calmodulin-binding Proteins AT3G25230 29.944 8.55e-61 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01362 - - gmx:100818201 1136.32