Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01354 ATGGCCAAAGACTATGGAGAAGTTCAGTTGTTTGGTGTGGGAGGAAGCCCCTTTGCTAGGAGGGTGCAAATTGCCCTGGAACTGAAGGGAATTCAATACACTTACTTTGAAGAAGACCTTAGGAATAAGAGTGATCTTCTTCTCAAATACAACCCTGTTCACAAGAAGGTGCCTGTGCTTGTCCACAATGGAAAACCCTTGGCTGAGTCCCTTGTGATCCTTGAATACATTGATGAGACATGGGAGAACCACCACCCCATCTTGCCTCAACAGCCCTATGATAGAGCCTTGGCTCGATTCTGGTCAAGGTTTATTGATGACAAATGCCTGCCTGCAATATCAAAGGCCGCATTTACTGCAAACAAGGAGGAACGTGACAAGGGCACTGAGGAATCACTTGAGTCTCTTCAAATTCTTGAGAATGAACTCAAACACAAGTTCTTTGGAGGAGAGACTATAGGCCTAGTGGACATAGCCGCTGGCTTCATAGCTTTCTGGCTCCCTGCGATTGAAGAGGCTGTGGAGTTAAAATTGTTGAGCCTATGA 546 0.4597 MAKDYGEVQLFGVGGSPFARRVQIALELKGIQYTYFEEDLRNKSDLLLKYNPVHKKVPVLVHNGKPLAESLVILEYIDETWENHHPILPQQPYDRALARFWSRFIDDKCLPAISKAAFTANKEERDKGTEESLESLQILENELKHKFFGGETIGLVDIAAGFIAFWLPAIEEAVELKLLSL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01354 181 CDD GST_C_Tau 92 179 IPR045074 GO:0004364|GO:0006749
Pumo7g01354 181 Gene3D Glutaredoxin 1 90 - -
Pumo7g01354 181 FunFam Glutathione S-transferase U10 1 87 - -
Pumo7g01354 181 CDD GST_N_Tau 8 81 - -
Pumo7g01354 181 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 181 IPR010987 -
Pumo7g01354 181 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Pumo7g01354 181 SFLD Main.3: Omega- and Tau-like 6 179 IPR045073 -
Pumo7g01354 181 Pfam Glutathione S-transferase, C-terminal domain 108 174 IPR004046 -
Pumo7g01354 181 Gene3D - 91 180 - -
Pumo7g01354 181 SFLD Glutathione Transferase (cytosolic) 6 179 IPR040079 -
Pumo7g01354 181 SUPERFAMILY Thioredoxin-like 8 109 IPR036249 -
Pumo7g01354 181 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Pumo7g01354 181 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 13 175 IPR045073 -
Pumo7g01354 181 SUPERFAMILY GST C-terminal domain-like 79 178 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01354 Pumo-Chr7 33740593 33742586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01354 8 180 Glutathione S-transferase Gene Family AT3G09270 54.857 1.15e-66 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01354 K00799 - gmx:100819805 347.051