Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01337 ATGGCTGAGGGTTTTGAGGCTTACCATGTTCCACAACAGAGCAGAAGAGACAAGCTGAGAGTTGTGGTGACACAAAACCAACATGGTCTCGTTGAACCCTCGGCTTTGCTTCCTTTGTACGACCCTTCTTCGTTCATATCTTCTGATTTGTTAACGAGCTTCCATAATAGCCAAAAACACAACTTGGGTTGTGGTGTGAAGGAAGAACGTGCCAATTTGATGATGGGTTTTGCAGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGTTATGAACAATGGCTCTTCTTCTTCCTCGTGTTGTTCTTCTAACTCCTCTTCGGTTTCTTACTTGGATCCTGAATCGTCTTTGCCTTTGAATCACCAAGCCACAATTCAGGTTATTAACAACAACAACAATAGCAGCAACAACAACAACAGCAACAACAACAACATGTTCCTCTACCAAGCACAGAACCTGAGAGAGTTTGATCAGGGTTATAATAATAATAACAACAACAACAATAATAACAGTGAGATCATGGTGTTTAAGCCTGAGCCTTTGTCTTTGTCTCTGTCATCACACAACAACGGTGTGAATCTTCAGCGATATGGATCTGTGGTTTATGGTGATAAGGTTGGTGGTGGTGGTGGATGTGTGATTTATGGTGGTTCTGGTTTGAATGAGGTTTCGAGGTGCACAGTGCCAATGGGGCCATTCACTGGTTATGCTTCTATATTGAAGGGATCGAGGTTCTTGAAGCCTGCACAGCAATTATTGGAAGAGTTATGTGATGTTGGTGGAGTTTGTGCTGAGAAGATGGTGGCTGATGCATCTTTGATGGAACCTATTCCTCCTCCTCCTCCTGAGAGTTCAAGTGAAGATCCACTAGGGGATCATGGGGGTGATCAGGGTCGCAAAAAGTCAAGGCTGTTAACTATGCTTGATGAGGTTTACACGAGGTACAGGCAATACTATCAGCAGATGCATGCGGTAGTAACATCATTCGAGTATGTTTCAGGCCTGAGCAATGCAGCTCCCTATGCAAGTTTGGCTATAAAAGCCATGTCCAAACATTTTAGATGCTTGAAGAATGCAATCACTGATCAGCTTCAATTTGCCAATAAAGCTCATTTTCACATTAGCAACAGGAAGGATGAATCTCCAAGGTTTGGCAACAGTGATAGAGGCCCTTATGGCCAAAGGCCAGGGTTTCTTGAGCACCAACCTGTTTGGCGGCCTCAAAGAGGACTCCCCGAGCGTGCTGTGACTGTTCTCAGAGCATGGTTGTTTGAGCACTTTCTGCACCCTTATCCCACTGATACCGACAAGCTAATGTTGGCCAAACAAACTGGTCTATCTCGTAGCCAGGTGTCTAATTGGTTCATTAATGCAAGAGTAAGACTCTGGAAACCAATGGTGGAAGAAATACATATGCTAGAAACACGGCAAAAGAATCCACAGAAGGAAGAACATTGCAGGAACAAGTCAAGTGATCATTTGCCTTCTGATAACTCCATTGTGTCTGAGAATCCATCTACTTCCACAGATAAATTTCAGGAAGCTTCTTACAAGCACGCCATAAACGAACTTCCTAACATACCAGTCAGGACTCAGGAACAGCTGAATCTGCCCTGCACAAGCAATCAGCCAGGGGGTGTTGGAGTGAGCATGGGTGGCAGTGCAAGCAATAGTGTCTCACTCACACTAGGCCTTTATCAAAATCATGGTATTGGTTTGGCTGAACCTTTCCCCTTGAATGCGGCTCAGCGATTTGGTGTTGCTCTTGAAACCAACAATGAAGGCTATGTTATGAGTGGCTATGAGTCACAAAATAGGCATTTTGGAAGAGATGTCATTGGAGGACAACTGTTGCATGACTTTGTAGGCTGA 1869 0.4462 MAEGFEAYHVPQQSRRDKLRVVVTQNQHGLVEPSALLPLYDPSSFISSDLLTSFHNSQKHNLGCGVKEERANLMMGFAAAAAGGGGGGVMNNGSSSSSCCSSNSSSVSYLDPESSLPLNHQATIQVINNNNNSSNNNNSNNNNMFLYQAQNLREFDQGYNNNNNNNNNNSEIMVFKPEPLSLSLSSHNNGVNLQRYGSVVYGDKVGGGGGCVIYGGSGLNEVSRCTVPMGPFTGYASILKGSRFLKPAQQLLEELCDVGGVCAEKMVADASLMEPIPPPPPESSSEDPLGDHGGDQGRKKSRLLTMLDEVYTRYRQYYQQMHAVVTSFEYVSGLSNAAPYASLAIKAMSKHFRCLKNAITDQLQFANKAHFHISNRKDESPRFGNSDRGPYGQRPGFLEHQPVWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQKNPQKEEHCRNKSSDHLPSDNSIVSENPSTSTDKFQEASYKHAINELPNIPVRTQEQLNLPCTSNQPGGVGVSMGGSASNSVSLTLGLYQNHGIGLAEPFPLNAAQRFGVALETNNEGYVMSGYESQNRHFGRDVIGGQLLHDFVG 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01337 622 MobiDBLite consensus disorder prediction 492 511 - -
Pumo7g01337 622 MobiDBLite consensus disorder prediction 376 398 - -
Pumo7g01337 622 SUPERFAMILY Homeodomain-like 406 470 IPR009057 -
Pumo7g01337 622 SMART HOX_1 404 468 IPR001356 GO:0003677
Pumo7g01337 622 MobiDBLite consensus disorder prediction 474 511 - -
Pumo7g01337 622 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 135 492 - -
Pumo7g01337 622 Pfam Homeobox KN domain 421 460 IPR008422 GO:0003677|GO:0006355
Pumo7g01337 622 SMART prehox3 233 361 IPR006563 -
Pumo7g01337 622 MobiDBLite consensus disorder prediction 272 298 - -
Pumo7g01337 622 FunFam BEL1-like homeodomain protein 9 407 469 - -
Pumo7g01337 622 MobiDBLite consensus disorder prediction 474 491 - -
Pumo7g01337 622 ProSiteProfiles 'Homeobox' domain profile. 401 464 IPR001356 GO:0003677
Pumo7g01337 622 Pfam Associated with HOX 238 360 IPR006563 -
Pumo7g01337 622 Gene3D - 407 469 - -
Pumo7g01337 622 CDD homeodomain 404 465 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01337 Pumo-Chr7 33117740 33123641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01337 171 622 Homeobox Transcription Factor Family AT5G02030 50.704 3.33e-122 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pumo7g01337 POX 1.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01337 - - gmx:100805512 1038.87