Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01331 ATGTTGTTGTTGATTACTTACCTCAAAGGTATCGATAAAGAAAATGCCAAGAGGAAAGAGAAAGGCTATCACTGCTCTTATTGTGAAAGAGTATTCGGAAATTATCAAGGTCTTGAAGATCATGCAAAGGTACATGAAGTTGAGTTTAAGCGGTGCATCAATCAAATCATTCCTTTTCACAATTCAACGGATATCACTAAGTCCATTCCTAAACATGGGAATGTCTCAATGAAAACTTTGTATGGAGGTACAACAACCAATCCTTGTGTAACGAAAGGAAATTGTTATGGTGACAATAGCCGAGACGACCACAATTCATTGTTCATGCCTCCAAATTATTCTTCTACAAGAACCAACAATGCATCCTTGGTAGCGCCAATTCAGACTAAAGGGACCATTCCTTTTTCTCAATCTGTGGACCATCCAATTTATATGGGCTTCTCTAATAATCATATAGGTCATGCATCGGGTGCAAGTTCTGCTATAAGTCGTCAATTTGATGCTAGCAATCGACAATTTTTTATTGACGATTTTTCCAAACCTTTTAGAAACAATTTCCAAAATATCGGACATAATGGTAACAACCTTCCATATCCAGTCTTTGTTAGAAATCCTTATTTATCAAGGTATCACATGACTGAATTTGGTTTATCCAAATTTCCTAGCTCGATTGAGCCTAGTTTTGTTGATACCCAAACACATTCTGTTAGCTCAAACAATATTGACCAAAATTCTGAGAGAGTAAAAAAACACAATAGAGATGAAGTCCAAGAAAAAATTTCAATGATGAATCCACCCAAAAGGCTCAATATCAACTCTGGTCCACTTGTTTGTAATGCAAGAGAGATGCTGCAAAAGAAGGAAGCACTTTTTTCTACCAAAGATGCAAAGCCTGAAGCTATAGATGCAAATTTCTTCAAGGATGAAGGAAAGAATGGTTCTACTTCAGAGAGCACAAATCACGCAAAAGAACAACAAGGGGCTGATTTGGATCTTTCCCTTCATCTATAG 1011 0.368 MLLLITYLKGIDKENAKRKEKGYHCSYCERVFGNYQGLEDHAKVHEVEFKRCINQIIPFHNSTDITKSIPKHGNVSMKTLYGGTTTNPCVTKGNCYGDNSRDDHNSLFMPPNYSSTRTNNASLVAPIQTKGTIPFSQSVDHPIYMGFSNNHIGHASGASSAISRQFDASNRQFFIDDFSKPFRNNFQNIGHNGNNLPYPVFVRNPYLSRYHMTEFGLSKFPSSIEPSFVDTQTHSVSSNNIDQNSERVKKHNRDEVQEKISMMNPPKRLNINSGPLVCNAREMLQKKEALFSTKDAKPEAIDANFFKDEGKNGSTSESTNHAKEQQGADLDLSLHL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01331 336 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Pumo7g01331 336 MobiDBLite consensus disorder prediction 302 336 - -
Pumo7g01331 336 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Pumo7g01331 336 SUPERFAMILY beta-beta-alpha zinc fingers 19 48 IPR036236 -
Pumo7g01331 336 SMART c2h2final6 23 45 IPR013087 -
Pumo7g01331 336 Gene3D Classic Zinc Finger 7 72 - -
Pumo7g01331 336 MobiDBLite consensus disorder prediction 309 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01331 Pumo-Chr7 32977250 32978788 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pumo7g01331 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01331 - K09228 gsj:114425652 390.963