Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01330 ATGTTTTCTAATTTGTGTTGTTGTAATGTTCACACCATTGTTCTACTTGTTCTTGCACTTTTTCTACAGATATCGTCTCAGCTTGGGTCTAAGGTGGAACTGCTTCCTGGCTTTGAAGGCCCTCTTCCTTTTGAACTCGAAACTGGGTATGTGGGATTGGGAGAAACAGATGATGATGACATTGAAGTGTTCTACTACTTTGTTAAGTCAGAGAACAACCCTCAGAAAGACCCTCTTTTCCTTTGGCTAACTGGTGGTCCCGGTTGCTCTTCAATTTCGGGTCTTCTCTTTCAAATAGGTCCAATTGCATTCAACACTGACGAGTATGATGGGAGCTTGCCAAAATTGGTCTTGAGGCCACAATCCTGGACAAAGGTATCCAGCTTTATATTTGTAGATTTGCCTATTGGAACTGGCTTCTCGTATGCAAAAAATCTCTCTGCTCATCGGAATGACTGGAAAGTAGTTCACCATGCCCATCAATTTCTTAGAAAGTGGCTTATTGATCACCCAGAATTTCTTTCAAATGAATTCTACATTGGAGCTGATTCATATTCAGGCATTCCTGCCCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGAAATAGGTCTCCTACCACGGATAAATCTCCAGGGATATCTTCTAGGGAACCCCTTGACAACAATTACGAAAGAAAGAAATGATAGAATCCCCTTTGCTCATGGAATGGGACTTATTTCTGACGAACTCTATGTGTCATTGCAGAAAAATTGTAAGGGAGAGTATACAGATATAGATTCCAGAAATGAATTGTGTTTAAGAGATATCAACTACTTTGATGAGTGCCTTTCCAAAATTAATGACCATCACATTTTGATGTACTATTGTGAAGATGATTGGGCCGGTTACAGACAACATGCTCATAGGAGATCTCTGATTCAGAAGTTTGAGGCCTCTCCTAATTCTCATCTGACACTGCCAGACAGAAGATGCCAAAGCTATGATGATATGATTGTCAATCAATGGGCCAATGATGAGAGTGTTCAAAAGTCACTGCATATTAGAGAGGGAACTATAGACAAATTATGGGAACGCTGTTACCGCGATGGTTATGAGTTTCAGATCTCTAGTAGCTTCGAGTTCCATGTAAATGTCAGCGCAAAAGGCTACCGTTCCTTAATATACAGTGGGGATCATGATGCAATGGTTCCTTTCTTGTCGACCCAAGCATGGATTAGGGCTCTAAACTACTCTATTGTGGATGATTGGAGGCCATGGATTGTAAAAGACCAAGTTGCAGGATACACAAGGACTTACTCAAATCAAATGACTTTTGCAACTGTGAAGGGTGCAGGGCATCTAGCTTCCATTTATAAAACTGAAGAATGTTTCTCCATGTTCACAAGGTGGATAACTAAGGAGCCTTTGTAA 1413 0.4055 MFSNLCCCNVHTIVLLVLALFLQISSQLGSKVELLPGFEGPLPFELETGYVGLGETDDDDIEVFYYFVKSENNPQKDPLFLWLTGGPGCSSISGLLFQIGPIAFNTDEYDGSLPKLVLRPQSWTKVSSFIFVDLPIGTGFSYAKNLSAHRNDWKVVHHAHQFLRKWLIDHPEFLSNEFYIGADSYSGIPAPAIVQEISNGNEIGLLPRINLQGYLLGNPLTTITKERNDRIPFAHGMGLISDELYVSLQKNCKGEYTDIDSRNELCLRDINYFDECLSKINDHHILMYYCEDDWAGYRQHAHRRSLIQKFEASPNSHLTLPDRRCQSYDDMIVNQWANDESVQKSLHIREGTIDKLWERCYRDGYEFQISSSFEFHVNVSAKGYRSLIYSGDHDAMVPFLSTQAWIRALNYSIVDDWRPWIVKDQVAGYTRTYSNQMTFATVKGAGHLASIYKTEECFSMFTRWITKEPL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01330 470 Gene3D alpha/beta hydrolase 37 469 IPR029058 -
Pumo7g01330 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 453 IPR001563 GO:0004185|GO:0006508
Pumo7g01330 470 Pfam Serine carboxypeptidase 36 466 IPR001563 GO:0004185|GO:0006508
Pumo7g01330 470 FunFam Carboxypeptidase 323 470 - -
Pumo7g01330 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Pumo7g01330 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Pumo7g01330 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Pumo7g01330 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Pumo7g01330 470 SUPERFAMILY alpha/beta-Hydrolases 35 469 IPR029058 -
Pumo7g01330 470 FunFam Carboxypeptidase 373 467 - -
Pumo7g01330 470 FunFam Serine carboxypeptidase-like 11 26 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01330 Pumo-Chr7 32942647 32954076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01330 26 63 Calmodulin-binding Proteins AT2G22960 57.895 9.10e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01330 K16296 - gmx:100780069 732.635