Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01326 ATGAGCATGGTTTCTAATATGTGTTGCAATTTTCACATTATTCTTCTAATTGGTCTTGCACTTTTAGTACAGATATCATCTCAGCTTGGCTCCAAGATATCATCTCAGCTTGGCTCCAAGGTAGAAGTGCTTCCTGGCTTTGAAGGATCACTTCCTTTTGATCTGGAAACAGGGTATGTAGGATTGGGAGAAACTGATGATGACTTGCAAGTGTTTTACTACTTTATTAAGTCAGAGAATGACCCTCAGAAAGACCCTCTTATGCTTTGGCTAACTGGTGGTCCTGGTTGCTCTTCATTGTCGGCTCTTACCTTTCAAATAGGTCCTATTAAATTCAAGACTCAAGAGTATGATGGGAGCTTGCCAACTTTGATCTTGAGGCCACAGACCTGGACAAAGTTATGTAGCATTATTTTTGTAGATCTGCCTTTTGGAGCTGGCTTCTCATATGCAAAAAATCTCACAGCTCAACGGAGTGACTGGAAATTAGTTCACCATACCCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCAGAATTTCTTTCAAATGAATTTTACATGGGAGCTGATTCATATTCTGGCATACCTGGCCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGAAATAGGTCTCCAACCACGGATAAATCTCCAGGGATATCTACTGGGGAACCCCTTAACAACACGAAAAGAAAAAAATGATCAAATCCCATTTGCTCATGGAATGGGACTTATTTCTGATGAACTCTATGCGTCCCTGCAGAGAAATTGTAAAGGAGAGTATATAGATGTAGATTCCAGAAATGAATTATGTTTAAGAGATAGCAACCACTATGACGAGTGCCTTTCAAGAATTACTGAGGTGAACATTTTGGATCGCTATTGCAAAGATGATTCTCCTAATAAACATGAAGCTCTGTGGAGGAGATCTCTGACTCAGAAGTTTGAGGCCTCTCTTAATTCTCATCTCAGAGTGCCAGACATGAGATGCCAAAGTTATACTTTCTTCCTTGCCACTCAATGGGCCAACGATGAGAGTGTTCACAAGTCGCTGCATATTCGAGAGGGAACTACAGGAAAATGGGAACGTTGTAACAACAGTACTGATTTTGAGTATCAGATCTCTAGTAGCTTCGAGTTTCACGTAAATCTGAGTGCCAAAGGGATACCGTTCTTTAATATACAGCTGATTTCTTATGGCAATTGGTGTTTTGTTGACAGTGGAGATCATGATGCAGTTGTTCCTTTCATGTCAACTCAAGCATGGATTAGGGCTCTAAACTACTCCATTGTGGAAGATTGGAGGCCATGGCTTCTAGAAGACCAAGTTGCTGGATACACAAGGACATACTCGAATCAAATGACATTTGCAACTGTGAAGGATTCGGGACATACAGCTCCCGAGTATAAGCCTGAGGAAGGTTTTGCCATGTTCTCTAGATGGATATCTAATGTGCCTTTGTAA 1470 0.4075 MSMVSNMCCNFHIILLIGLALLVQISSQLGSKISSQLGSKVEVLPGFEGSLPFDLETGYVGLGETDDDLQVFYYFIKSENDPQKDPLMLWLTGGPGCSSLSALTFQIGPIKFKTQEYDGSLPTLILRPQTWTKLCSIIFVDLPFGAGFSYAKNLTAQRSDWKLVHHTHQFLRKWLIDHPEFLSNEFYMGADSYSGIPGPAIVQEISNGNEIGLQPRINLQGYLLGNPLTTRKEKNDQIPFAHGMGLISDELYASLQRNCKGEYIDVDSRNELCLRDSNHYDECLSRITEVNILDRYCKDDSPNKHEALWRRSLTQKFEASLNSHLRVPDMRCQSYTFFLATQWANDESVHKSLHIREGTTGKWERCNNSTDFEYQISSSFEFHVNLSAKGIPFFNIQLISYGNWCFVDSGDHDAVVPFMSTQAWIRALNYSIVEDWRPWLLEDQVAGYTRTYSNQMTFATVKDSGHTAPEYKPEEGFAMFSRWISNVPL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01326 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Pumo7g01326 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Pumo7g01326 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Pumo7g01326 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Pumo7g01326 489 Pfam Serine carboxypeptidase 45 486 IPR001563 GO:0004185|GO:0006508
Pumo7g01326 489 Gene3D alpha/beta hydrolase 40 488 IPR029058 -
Pumo7g01326 489 FunFam Serine carboxypeptidase-like 11 35 489 - -
Pumo7g01326 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 473 IPR001563 GO:0004185|GO:0006508
Pumo7g01326 489 SUPERFAMILY alpha/beta-Hydrolases 44 488 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01326 Pumo-Chr7 32751476 32784325 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01326 35 64 Calmodulin-binding Proteins AT2G22960 60.000 6.77e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01326 K16296 - gmx:100780069 823.928