Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01282 ATGGCGCAGGCGGCGGCGGGGCGGAGCAGGGTGGTGGGAGACTACGTGGTGGGGAAGCAAATCGGCGCGGGGTCGTTCTCGGTGGTGTGGCACGGGAGGCACAAGGTGCACGGAACCGAGGTGGCGATCAAGGAGATCGCCACGCTTCGCCTCAACAAGAAGTTGCAGGAGAGCCTCATGTCCGAGATTTTCATCTTGAAGCGGATTAACCACCCTAACATAATCTCTTTGCACGACATCATTGAGGTTCCTGGGAAGATACATCTTGTGTTAGAGTACTGTAAAGGGGGAGATCTTTCCTTGTACATTCAACGCCATGGAAGGGTACCAGAGGCAACTGCAAAGCATTTTATGCAGCAGCTGGCTGCTGGTCTACAAGTTCTTCGGGATAATAACGTTATTCATCGAGACCTGAAACCACAGAACCTTCTTCTCTCCCGAAACGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCTAGGGGCCTTGCTGAAACCTTGTGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTACAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTTGGTGCAATCTTATTTCAGCTTGTTACAGGAAGAACGCCTTTCACTGGAAACAATCAAATACAGTTACTACAAAATATTATAAAATCAACAGAATTGCAGTTTCCATCTGATAGCCCAAGTCTGAGTTTTGAATGCAAAGATTTGTGTCAGAAATTGCTACGTCGGAATCCAGTGGAACGTCTAACTTTCGAAGAATTCTTTAACCACCCATTCCTTTCTCAGAAGCAAAGAGAACAGGATGAGCCATTGTTGAGGAATAGAAGTTCTTCAAGGCTGGTTGGTGGGTTTTGTTCTACAGTGTCTGACCCTTTGAGAAGAACTGAGGAAAATTATCAAGAGGATTGTTTGCCTTTCATCTTAGATGAAGACTCTAGTGGCCCTGAGGGGAGTCCATCCTTTTCAAGGAAGAAGTCCTCAATGAAGTCGACCTATGGATTTGATCTAAATGCTAAACTAGATAAAGCAGAGTCAGCGTCTCCTATTTCTAATAACATAAATTGTACTTCTGGATATGGTAGTATGACACAAAGATCTGAAAACACTACTAAAAGATTGGACAAGCATAAAATTTCAAGAAATCTCACTGATCCTTTAGAATCTCCAGAACAGCTATTCACAAGTCCTTATCCAAAAGTTACGGATTCACTGGAGAATATTGAGCAAGAATATGTTCTGGTGTCTGGGCCCCCTATAGACGTTTCATCTTCTTCAGTGGGTGCTTCAAGGCCCAGCCATACCCCATATTGGTCAGGTAGTTTACCCCAAGAGTCTTCTAGTACAATCACTAGACTAAGTGCTCCAATGCCAATAGTTGGTGTACCTACCAATAGCATATGCCAAATTGGAAGTTCAGGAAGTCAGGACTCTGCTCCTGGGACTTCGCTTGGATCAATAGATACAGGTGATGAACAGCCATCAGCTCACTGCATGACAAGGGTCAAATCATTGCAACAGTGTGCATCTGCCATCACGGAATTAGTTAATGAAAAGATGGAGGCAGGAAAGCATCTAGAAGCATTTTCTATTCAGCTTGTAATTCTTGCAATCTGGAAGCAAGCACTGCACATATGCCATACACAAGCTGCCTCAGCCATGGAAGGAAGTCCAAATCAAGAAACTTCAAGATATAGAAGGAGCACCGGCAGGAAGCATGGTACTCCTGATTCGGAAGAATGCCTTGATGGAAACACCCTAGGGCCGAAGTATATATTATCTCAAATTGAAAGTGAATTTTTGAGGGAATTTGAGCATGCTGAAGAACTTGCCAAGACCATTGAGCCTGGAAACACAGAGATGCCAGATGCAATGGAGACGATTTTTCAATCCGCCCTTGCTTTTGGAAGACATGGGGGTGTAGAAGAGCTCATGGGTGAAATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTGCGTCTGTTAGTTTTCCTTCTAGTGGAAGGACCATCCCTGATTCTTAATCCTCCGTTTTCTCTGACAAACTCAGACCGTTACAGGCTTCGGAATTACATTGATATTCTTAATAACAGGCAAGGTTATTCAAGGTCCCAGCGAGTGGCACTACTGAAATGTGATGACAGTCAAGGTATCCTTAAGGAAAAGTTTTAG 2205 0.4435 MAQAAAGRSRVVGDYVVGKQIGAGSFSVVWHGRHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIISLHDIIEVPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMQQLAAGLQVLRDNNVIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIIKSTELQFPSDSPSLSFECKDLCQKLLRRNPVERLTFEEFFNHPFLSQKQREQDEPLLRNRSSSRLVGGFCSTVSDPLRRTEENYQEDCLPFILDEDSSGPEGSPSFSRKKSSMKSTYGFDLNAKLDKAESASPISNNINCTSGYGSMTQRSENTTKRLDKHKISRNLTDPLESPEQLFTSPYPKVTDSLENIEQEYVLVSGPPIDVSSSSVGASRPSHTPYWSGSLPQESSSTITRLSAPMPIVGVPTNSICQIGSSGSQDSAPGTSLGSIDTGDEQPSAHCMTRVKSLQQCASAITELVNEKMEAGKHLEAFSIQLVILAIWKQALHICHTQAASAMEGSPNQETSRYRRSTGRKHGTPDSEECLDGNTLGPKYILSQIESEFLREFEHAEELAKTIEPGNTEMPDAMETIFQSALAFGRHGGVEELMGEMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRVALLKCDDSQGILKEKF 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01282 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Pumo7g01282 734 MobiDBLite consensus disorder prediction 368 408 - -
Pumo7g01282 734 SMART serkin_6 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01282 734 ProSiteProfiles Protein kinase domain profile. 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01282 734 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pumo7g01282 734 MobiDBLite consensus disorder prediction 481 501 - -
Pumo7g01282 734 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 5 643 IPR045269 GO:0004674|GO:0006914
Pumo7g01282 734 MobiDBLite consensus disorder prediction 562 592 - -
Pumo7g01282 734 MobiDBLite consensus disorder prediction 576 590 - -
Pumo7g01282 734 CDD STKc_ATG1_ULK_like 21 271 - -
Pumo7g01282 734 Gene3D Transferase(Phosphotransferase) domain 1 6 313 - -
Pumo7g01282 734 SUPERFAMILY Protein kinase-like (PK-like) 11 457 IPR011009 -
Pumo7g01282 734 MobiDBLite consensus disorder prediction 481 505 - -
Pumo7g01282 734 FunFam Non-specific serine/threonine protein kinase 1 95 - -
Pumo7g01282 734 FunFam Serine/threonine-protein kinase ATG1 7 314 - -
Pumo7g01282 734 MobiDBLite consensus disorder prediction 319 339 - -
Pumo7g01282 734 Pfam Protein kinase domain 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01282 734 MobiDBLite consensus disorder prediction 380 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01282 Pumo-Chr7 31221359 31229890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01282 11 272 CBL-interacting serine-threonine protein kinases AT2G30360 38.060 3.87e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Pumo7g01282 Pkinase 7.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01282 K08269 - gmx:100791596 1365.13