Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01281 ATGAAAGCTTATGGATCATTTCTATATTGGACTTCTCCTACCATGGTTTCTGCTGTTGTTTTCCTCGGCTGTGCTCTTTTCAACAGTTCCCAATTGAATGCTGGGACCATTTTCACGGTTCTTGCAACTTTGAGGAACTTGGGAGAACCTGTTCGAACGATCCCAGAAGCACTATCTATTATGATCCAAGTTAAGGTCTCCTTTGATCGTCTCAATACCATTTTGCTTGATGAAGAGCTAGTTGGTAGAGATCTTAACAGAAGAAATATAAAGCAAAGTTCAGTTAATGCGGTGGAAATCCAAGCTGGCAACTTTATTTGGGATCATGAATCAGTGTCCCCAACTTTAAAAGATGTGAATTTAAAAATCAAATGGGGACAAAAAATTGCAGTTTGTGGGCCAGTTGGAGCTGGAAAATCATCTCTTTTGTATGCAGTACTTGAAGAGATTCCCAAGATCTCAGGAACTGTTAACGTGTGCGGCACCATAGCCTATGTTTCTCAAACTTCTTGGATACAAAGTGGGACAGTTCGAGATAACATACTCTTCGGCAAGCCAATGGACAAAACAAGATATGAGAATGCCATTAAAGTTTGTGCTTTAGGTAAGGATATTAATGGTTTCAGCCATGGTGATCTTACAGAAATAGGTCAGCGAGGGATTAACATGAGTGGGGGACAAAAGCAAAGGATTCAACTAGCTCGTGCAGTCTACAATGATGCTGACATCTATCTCCTTGATGACCCTTTCAGTGCAGTTGATGCTCACACTGCTGCTATTCTCTTCAATGACTGTGTAATGACAGCTCTAAGAGAGAAAACAGTCATTCTAGTGACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATACAATCCTGGTTATGGAAGGTGGAAAAGTCACTCAATCAGGTAATTATGAGAATCTCCTGACAGCTGGGACAGCCTTTGAACAGCTTGCTTCATCAGATTTAAGTATTTTGGACTTTCGATATACCTTTTGCATCACTTTTGTAGCATCTGTTCCAATTGAAATTGTGACAGCAATTTGTATAATGGTTTCTGTAACATGGCAAGTTCTCATTGTCGCTGTTCTTGCAATGGTTGCATCAAAATATGTTCAGGGATATTATCAAGCATCAGCAAGGGAATTAATAAGGATCAATGGAACCACAAAAGCTCCTGTCATGAATTTTGCGGCTGAGACATCACTTGGTGTGGTTACTGTTAGAGCGTTTAACATGGTTGACAGATTTTTTAAAAATTACTTAAAGCTTGTGGACACAGACGCGACACTGTTCTTTCATTCTAATGTGGCCATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCAAAATTTGACAGTCATCACTGCAGCTTTGTTACTTGTTCTTGCTCCTCAGGGATATGTGTCCCCAGGCCTTGTGGGACTGTCTCTATCTTATGCTTTCAACTTGACAACATCCCAAATATTTTGGACTCGATGGTATTGCAACTTATTAAACTATATTATCTCTGTTGAAAGAATCAAACAATTCATTCACCTACCAACGGAGCCTCCTGCCATTGTGGAGGACACAAGGCCTCCATCTTCATGGCCTTCCAAAGGCAGGATTGACCTTCAAGCCATAGAGGCTTTAGAAAAATGTCAGCTTAAGGAAACTATCAGTCGTCTACCAAATCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAGCGCCAACTGTTTTGCCTTGGAAGAGTACTACTCAAGAGGAACAAAATTCTTGTTCTGGATGAAGCTACTGCCTCTGTTGACTCTGCCACAGATACCATTCTACAACGAATAATTAGACAAGAATTTGCAGGCTGCACAGTTATAACGGTGGCTCACAGGGTTCCAACTGTAATAGATAGTGACATGGTCATGGTCCTGTCCCATGGGAAATTGGTGGAATATGACGAGCCTTCAAAGCTAATGGAAACCAACTCTTCGTTCTCTAAGCTGGTAGCTGAATATTGGTCCAGCCGCAGGAAGAATTCCTCCTCAAATATTAGCAGCCAGCAGCATTGA 2064 0.4123 MKAYGSFLYWTSPTMVSAVVFLGCALFNSSQLNAGTIFTVLATLRNLGEPVRTIPEALSIMIQVKVSFDRLNTILLDEELVGRDLNRRNIKQSSVNAVEIQAGNFIWDHESVSPTLKDVNLKIKWGQKIAVCGPVGAGKSSLLYAVLEEIPKISGTVNVCGTIAYVSQTSWIQSGTVRDNILFGKPMDKTRYENAIKVCALGKDINGFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMTALREKTVILVTHQVEFLSEVDTILVMEGGKVTQSGNYENLLTAGTAFEQLASSDLSILDFRYTFCITFVASVPIEIVTAICIMVSVTWQVLIVAVLAMVASKYVQGYYQASARELIRINGTTKAPVMNFAAETSLGVVTVRAFNMVDRFFKNYLKLVDTDATLFFHSNVAMEWLVLRIEALQNLTVITAALLLVLAPQGYVSPGLVGLSLSYAFNLTTSQIFWTRWYCNLLNYIISVERIKQFIHLPTEPPAIVEDTRPPSSWPSKGRIDLQAIEALEKCQLKETISRLPNLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNKILVLDEATASVDSATDTILQRIIRQEFAGCTVITVAHRVPTVIDSDMVMVLSHGKLVEYDEPSKLMETNSSFSKLVAEYWSSRRKNSSSNISSQQH 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01281 687 Gene3D - 93 316 IPR027417 -
Pumo7g01281 687 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Pumo7g01281 687 FunFam Multidrug resistance protein associated1 76 328 - -
Pumo7g01281 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 422 669 IPR003439 GO:0005524
Pumo7g01281 687 Gene3D - 515 684 IPR027417 -
Pumo7g01281 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 540 668 IPR027417 -
Pumo7g01281 687 Pfam ABC transporter 538 600 IPR003439 GO:0005524
Pumo7g01281 687 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 318 - -
Pumo7g01281 687 CDD ABCC_MRP_domain1 98 298 - -
Pumo7g01281 687 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 317 487 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo7g01281 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 100 321 IPR003439 GO:0005524
Pumo7g01281 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 320 IPR027417 -
Pumo7g01281 687 SUPERFAMILY ABC transporter transmembrane region 319 519 IPR036640 GO:0005524|GO:0016020
Pumo7g01281 687 Pfam ABC transporter transmembrane region 320 481 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pumo7g01281 687 SUPERFAMILY ABC transporter transmembrane region 5 75 IPR036640 GO:0005524|GO:0016020
Pumo7g01281 687 SMART AAA_5 125 298 IPR003593 GO:0016887
Pumo7g01281 687 Gene3D ABC transporter type 1, transmembrane domain 1 81 IPR036640 GO:0005524|GO:0016020
Pumo7g01281 687 ProSitePatterns ABC transporters family signature. 223 237 IPR017871 GO:0005524|GO:0016887
Pumo7g01281 687 Gene3D ABC transporter type 1, transmembrane domain 317 514 IPR036640 GO:0005524|GO:0016020
Pumo7g01281 687 Pfam ABC transporter 116 250 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01281 Pumo-Chr7 31124728 31131118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01281 535 667 Calmodulin-binding Proteins AT2G36910 31.884 4.15e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01281 - - gmx:100784827 582.793