Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01239 ATGACAATGAATCCACACCTTATGGGGTTTTCTGATTCTACAAATGAGATTCGGTTGGGAAATCAATCTTTGCCAATTCTTCAGAATCAGATATTTGATAATGGACCCAGATTTGAAAATCTCTTCTTTGATCAGAGTAGGAATTTTGATTATCTTCAATCTGATCCAAATCCAATACCAGCTAACACACCCTCATCCCCCACTGTGACCCATGAGGAGCATTCTCCAGAGGACTGTGATTTTTCTGATGCAGTTTTGAGTTACATCAGCCAGATCCTCATGGAGGAAGACATGGAGGACAAGGCATGCATGATTCAAGATCCTTTAGATATTCAAGCAGCAGAGAAATCTTTCTATGAGGTTCTTGGTGAAAAGTACCCACCTTCTCCAAGAAATCCAAGCCTTATCAATGATGGGGTTGGAGGTTATGACTTCTCTGGAGATTATTGCAATTGTCCTGATACTAATGGGGATCTCATGAGCATTTTTACTAATCCTTTTTTGCCTCCAAACTCAGGTAACTTTCCTGCACTTAGTCTTGATGGTAATGGCATTTCACATTCATCTTACAACCCTTCCAATAGTGTGGAAGGGCTTGTAGATTCTTCAAACAGTATTGTTCAGGTTCCTGATCTGAACAGTGAAAGTCAATCCATTTGGCAATTTCAGAAAGGTGTTGAGGAGGCTAGTAAGTTTCTTCCTAGCGCAAACGGGCTGTTTGCTAATTTGTCACAACCAGCGCCAAAAGTAGAAAAGGATGAATTCTCATATAAAGTGGAGAAGGAGGAGGGGGAATATGTTAATGGTGGATCCAAGGGAAGGAAGCATCCTCAAATGGATGAGGCAGATGATGAAGAAAACAGAAGCAGCAAGCAAGCGGCAATTTTTTCTGAACCAACATTGCGGTCAGATATGGCTGATATAATGCTTCTTCATAGCACTGGGGATGGTAAGGACCACTATGTGGCTCGCCGCGAGGCTTTGCAGAATAAGACACAGAAGGCAGTGTTGCCAAAAGGTCAATCAAAAGCATCCAGCAGTGGGAAGGGGCGCGGTAAGAAACAAGGTGGGAGGAAGGAAGTGGTTGATTTGAGAACACTTCTGGTTCTATGTGCACAAGCTGTTGCAGCAGATGACCATAGGAATGCCAATGAGTTGCTGAAGCAGATCAGGCAACACTCAACCCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTTGCTGATGGCCTTGAGGCGCGTTTGGCTGGTACTGGCAGCCAAATTTACAAAGGACTTGTTGGCAAAAGAACATCAGCTGCTAATTATCTAAAAGCTTATCATCTATACCTTGCTGCATGCCCATTTAGGAAAATTTCTAACTTTTCCTCAAACATCACAATAAGGGGATCTTCAGCAGAGTCAATGAAGGTCCATGTTATAGATTTTGGTATCCTTTATGGTTTCCAATGGCCCACTTTTATACAGCGGCTTTCATGGAGAGCAGGAGGACCACCAAAGCTACGGATAACAGGAATAGACTTCCCACAACCTGGTTTCAGGCCAGCAGAAAGAATTATAGAAACAGGACGCCGCTTGGCAGCTTATGCTGAGGCCTTTAATGTTCCATTTGAGTACAAAGCCATAGCAAAAAAATGGGAGACAATTCAACTTGAGGAACTTGAGATTGATAGGGATGAGTTCCTTGTTGTTACTTCTTTATATAGAGGTAAGAACTTGCTGGACGAATCTGTGGTAGTAGACAGTCCAAGAAATAATTTCCTCAGCCTGATTAGGAAGATCAACCCAAAGTTGTTCATTCATGGCATCATGAATGGGGCGTTTAATGCCCCTTTCTTTGTTACCAGATTCCGGGAGGCATTGTTTCACTACTCATCAATGTTTGATATGCTTGAGACTATTGTGCCTCGTGAAGACTGGGAGAGGATGCTGATAGAGAAAGAGATATTCGGGAGGGAAGCATTGAATGTCATAGCTTGTGAAGGGTCTGAAAGAGTGGAGAGGCCAGAGAGCTATAAGCAGTGGCAAGCACGCATTCTGCGGGCCGGGTTTGTGCAACAACCTTTTGATCGCGAGACAGTGAAGATGGCAATGCAGAAAGTGAGGGGTAGCTACCACAAGGATTTTGTGATTGATGAAGATAGCCAGTGGTTGTTGCAAGGTTGGAAGGGGCGTATCATTTATGCCCTTTCTTGTTGGAGACCTGCATGA 2214 0.435 MTMNPHLMGFSDSTNEIRLGNQSLPILQNQIFDNGPRFENLFFDQSRNFDYLQSDPNPIPANTPSSPTVTHEEHSPEDCDFSDAVLSYISQILMEEDMEDKACMIQDPLDIQAAEKSFYEVLGEKYPPSPRNPSLINDGVGGYDFSGDYCNCPDTNGDLMSIFTNPFLPPNSGNFPALSLDGNGISHSSYNPSNSVEGLVDSSNSIVQVPDLNSESQSIWQFQKGVEEASKFLPSANGLFANLSQPAPKVEKDEFSYKVEKEEGEYVNGGSKGRKHPQMDEADDEENRSSKQAAIFSEPTLRSDMADIMLLHSTGDGKDHYVARREALQNKTQKAVLPKGQSKASSSGKGRGKKQGGRKEVVDLRTLLVLCAQAVAADDHRNANELLKQIRQHSTPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVGKRTSAANYLKAYHLYLAACPFRKISNFSSNITIRGSSAESMKVHVIDFGILYGFQWPTFIQRLSWRAGGPPKLRITGIDFPQPGFRPAERIIETGRRLAAYAEAFNVPFEYKAIAKKWETIQLEELEIDRDEFLVVTSLYRGKNLLDESVVVDSPRNNFLSLIRKINPKLFIHGIMNGAFNAPFFVTRFREALFHYSSMFDMLETIVPREDWERMLIEKEIFGREALNVIACEGSERVERPESYKQWQARILRAGFVQQPFDRETVKMAMQKVRGSYHKDFVIDEDSQWLLQGWKGRIIYALSCWRPA 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01239 737 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 291 729 IPR005202 -
Pumo7g01239 737 ProSiteProfiles GRAS family profile. 355 735 IPR005202 -
Pumo7g01239 737 MobiDBLite consensus disorder prediction 330 358 - -
Pumo7g01239 737 MobiDBLite consensus disorder prediction 263 291 - -
Pumo7g01239 737 Pfam GRAS domain family 364 735 IPR005202 -
Pumo7g01239 737 MobiDBLite consensus disorder prediction 53 77 - -
Pumo7g01239 737 MobiDBLite consensus disorder prediction 334 349 - -
Pumo7g01239 737 MobiDBLite consensus disorder prediction 263 298 - -
Pumo7g01239 737 MobiDBLite consensus disorder prediction 53 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01239 Pumo-Chr7 29238419 29241616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01239 77 736 GRAS Transcription Factor Family AT2G37650 55.786 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo7g01239 GRAS 2.9e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01239 - - gmx:100780785 1339.71