Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01236 ATGGGTGCTTGCTGGAGCAGTAGGATTAAGGCTGTGAGTCCTTCCAATACAGGGTTCACATCTAGAAGTGTGAGCAGAGATGGCTATGACATCCACTCAAGTAGCAGAAACTCATCAGCCTCCATACCCATGACCCCTCGGAGCGAGGGCGAGATCTTACAATCTTCCAATTTGAAAAGCTACAGCTACAATGAGCTAAAAACAGCCACAAAAAATTTCAGCCCAGACAGTGTCTTAGGAGAGGGTGGATTTGGTTCAGTTTTCAAGGGCTGGATTGATGAACATTCGCTTGCTGTTACCAGGCCAGGAATAGGCATGGTTGTTGCTGTGAAGAGACTTAACCAAGAGGGTTTCCAGGGTCACAAGGAATGGTTGGCTGAAATCAACTATCTTGGGCAACTGCAGCATCCTAATCTTGTCAAGTTGATAGGCTACTGCTTAGAGGATCAGCACCGGCTTCTAGTTTATGAGTATATGCCCAAAGGCAGTGTGGAGAATCATCTGTTCAGAAGAGGATCTCATTTTCAGCAGCTTTCTTGGACTTTGAGATTGAAAATATCCCTTGGGGCTGCAAGGGGTCTTGCTTTTCTCCATGGCACAGAAACTAAAGTCATATACCGAGACTTTAAGACTTCCAATATCCTGCTTGATACTAACTATAATGCCAAACTTTCTGATTTTGGGCTGGCCAGAGATGGACCAACTGGTGATAAGAGCCATGTTTCTACTAGGGTCATGGGAACCCATGGATATGCAGCACCAGAGTATCTAGCAACAGGTCACCTCACTGCTAAGAGTGATGTCTATAGTTTTGGAGTAGTTCTTTTGGAAATGTTATCAGGAAGACGTGCCATAGACAAGAACCGGCCATCTGGAGAGCAATGCCTAGTTGAATGGGCAAAGCCTTACCTTTCTAACAAACGCAGAGTTTTTCGCGTAATGGATAGTCGTCTTGAAGGCCAGTATTCCCTTAACCAAGCTCAAAGAGCAGCCACCCTTGCTTTTCAATGCCTTGCTGTAGAGCCCAAATACAGGCCAAATATGGATGAGGTGGTGAGAGCATTGGAGCAGCTACGCGAATCAAATGATCAGGTGAAAAATGGAGTTCATAAAAAGCGTAGAGTAAGTGGCTCTGGCCTTGGCCATCCCAATGGACTCCCTGCATCTACTAGCAAAGGAAGTGCAGATGCTCCCAAAAAGTTTGCTTATCCTAGGCCCTCTGCTTCTCTCCTTTTTGCTTAA 1242 0.4565 MGACWSSRIKAVSPSNTGFTSRSVSRDGYDIHSSSRNSSASIPMTPRSEGEILQSSNLKSYSYNELKTATKNFSPDSVLGEGGFGSVFKGWIDEHSLAVTRPGIGMVVAVKRLNQEGFQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDQHRLLVYEYMPKGSVENHLFRRGSHFQQLSWTLRLKISLGAARGLAFLHGTETKVIYRDFKTSNILLDTNYNAKLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAIDKNRPSGEQCLVEWAKPYLSNKRRVFRVMDSRLEGQYSLNQAQRAATLAFQCLAVEPKYRPNMDEVVRALEQLRESNDQVKNGVHKKRRVSGSGLGHPNGLPASTSKGSADAPKKFAYPRPSASLLFA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01236 413 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Pumo7g01236 413 MobiDBLite consensus disorder prediction 13 48 - -
Pumo7g01236 413 Gene3D Transferase(Phosphotransferase) domain 1 159 378 - -
Pumo7g01236 413 PANTHER OS01G0588500 PROTEIN-RELATED 37 359 - -
Pumo7g01236 413 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01236 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pumo7g01236 413 Coils Coil 348 368 - -
Pumo7g01236 413 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Pumo7g01236 413 MobiDBLite consensus disorder prediction 362 413 - -
Pumo7g01236 413 CDD STKc_IRAK 79 358 - -
Pumo7g01236 413 SUPERFAMILY Protein kinase-like (PK-like) 39 355 IPR011009 -
Pumo7g01236 413 FunFam Probable serine/threonine-protein kinase PBL8 159 374 - -
Pumo7g01236 413 FunFam Serine/threonine-protein kinase BIK1 40 158 - -
Pumo7g01236 413 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01236 Pumo-Chr7 29087446 29091295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01236 34 355 Glycoside Hydrolase AT3G07070 47.447 2.92e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo7g01236 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01236 - - gmx:100795058 780.785