Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01233 ATGCCAACGCGACCCTCGTTCGGAACTGATTTTATCTCCTTAATTTCATGTATTGCAGGAGGTTCAAGTAAGTGGGCAGTTATAGGTGGTGTTGTAGGAGCTGTTGTTGTTGTCCTCCTCCTCCTTGCATTGTTTGCACGGAGATGGTCTAGAAAACAAAATTTCAGAGCAGGTGACATATTGGGAGCAACTGCGTTGAAAGTTCCAGTTTACAAGTATAATGATTTAAAAGCTGCAACAAAGAATTTCAGTCATGAAAATAAACTTGGATCGGGGGGTTATGCTGATGTGTACAAGGGTACTCTGAGAGAGGGAAAAGTTGTTGCCATCAAGAAACTAAAGGTAGACAAAATAAAGGAGATGGAGGATGATTTCAAAGGTGAAGTCAAGCTTATGAATAATCTTCATCATCGGAATCTCGTTAGACTTCTTGGTTACTGCAGTGAAGGGGAAGAGAGAATCCTGGTTTATGAGTACATGGCAAATAATAGCCTTGAGAGATTGTTATTTGGTAACGAAAAACGTTCCCTCAATTGGAAAAAACGCTATGATATAATATTAGGCACAGCAATGGGACTGGCCTATTTGCATGAGGAATTGGACATGCTCGTGGTACATAGTGATATAAAGCCTGCTAATATCCTTCTAGATGAAAATTTTCAGCCCAAAATTGCTGATTTTGGGTTAGCAAGGATTTTGCCAGAGGATCATTCTCAACTTCACACAAGAGTTGGAGGAACACGGGGATACATAGCACCTGAGTATCAATTATCAGAGAAGGCTGATACCTACAGCTATGGTGTTGTAGTCCTAGAAATCATCAGTGGCCAAAAGTGTACCTATGAGAAACAACACGAGGATGGTCATGGAAACCTTCTTTATCGAGCATGGAAACTGTATGAGAGAGGCAGGCACTTGGACCTAGTGGACAATGCCATAGACAAAAATGATCATGATGAAGTGGGAAAAATCATAGAAATTGCTTTATTATGCAGTCAGGAACTAACTGCAAGACCAAAAATGTCTGAAGTAGTAGATTTTCTCAAACGCAAGAGCTTACCGAACTACCGGCAACTAGCTACGCCGACGTATTGTCAATCCTAA 1104 0.4085 MPTRPSFGTDFISLISCIAGGSSKWAVIGGVVGAVVVVLLLLALFARRWSRKQNFRAGDILGATALKVPVYKYNDLKAATKNFSHENKLGSGGYADVYKGTLREGKVVAIKKLKVDKIKEMEDDFKGEVKLMNNLHHRNLVRLLGYCSEGEERILVYEYMANNSLERLLFGNEKRSLNWKKRYDIILGTAMGLAYLHEELDMLVVHSDIKPANILLDENFQPKIADFGLARILPEDHSQLHTRVGGTRGYIAPEYQLSEKADTYSYGVVVLEIISGQKCTYEKQHEDGHGNLLYRAWKLYERGRHLDLVDNAIDKNDHDEVGKIIEIALLCSQELTARPKMSEVVDFLKRKSLPNYRQLATPTYCQS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01233 367 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 358 - -
Pumo7g01233 367 FunFam Cysteine-rich receptor-like protein kinase 2 160 356 - -
Pumo7g01233 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pumo7g01233 367 Gene3D Phosphorylase Kinase; domain 1 59 159 - -
Pumo7g01233 367 SMART serkin_6 83 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01233 367 SUPERFAMILY Protein kinase-like (PK-like) 66 348 IPR011009 -
Pumo7g01233 367 Pfam Protein kinase domain 84 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01233 367 CDD STKc_IRAK 89 350 - -
Pumo7g01233 367 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Pumo7g01233 367 Gene3D Transferase(Phosphotransferase) domain 1 160 359 - -
Pumo7g01233 367 FunFam receptor-like serine/threonine-protein kinase NCRK 61 159 - -
Pumo7g01233 367 ProSiteProfiles Protein kinase domain profile. 83 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01233 Pumo-Chr7 29058949 29061318 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01233 21 345 Receptor kinase-like Gene Family AT4G05200 43.988 3.07e-82 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo7g01233 Pkinase 7.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01233 - - vun:114187094 413.305