Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01231 ATGAGATTAGGAGGTTCAAGTAAGTGGGCAGTTATAGGTGGTGTTGTAGGAGCTGTTGTTGTTGTCCTCCTCCTCCTTGCGTTGTTTGCACGGAGATGGTCTAGAAAACAAAATTCCAGAGGTGACATATTGGGAGCAACTGAGTTGAAAGTTCCAGTTTACAAGTATAATGATTTAAAAGCTGCAACAAATAATTTCAGTCATGGAAATAAACTTGGATCGGGGGGTTATGCTGATGTGTACAAGGGTACTCTGAGAGAGGGAAAAGTTGTTGCCATCAAGAAACTAAAGGTAGACAAAATAAAGGAGATGGAGGATGATTTCAAAGATGAAGTCAAGCTTATGAGTAATGTTCATCATCGGAATCTCGTTAGACTTCTTGGTTACTGCAGTGAAGGGGAAGAGAGAATCCTGGTTTATGAGTACATGGCAAATAATAGCCTTGAGAGATTGTTATTTGGTAACGAAAAACGTTCCCTCAATTGGAAAAAACGCTATGATATAATATTAGGCACAGCAATGGGACTGGCCTATTTGCATGAGGAATCGGGCATGCGCATGGTACATAGAGATATAAAGGCTGCTAATATCCTTCTAGATGAAAATTTTCAGCCCAAAATTGCTGATTTTGGGTTAGCAAAGATTTTGCCAGAGGATCATTCTCAACTTTGCACAAGAGTTGGAGGAACATGGGGATACACAGCACCTGAGTATTTATTGTATCGTCAATTATCAGAGAAGGCTGATACCTACAGCTATGGTGTTGTAGTCCTAGAAATCATCAGTGGCCAAAAGTGTACCTCTGAGATACAACACGAGGAATATCATGGAAACCTTCTTTATCTAGCATGGAAACTGTATGAGAGAGGCAGGCACTTGGACCTAGTGGACAATGCCATAGACAAAAATGACTATGGTGCTTCAGAAGTGGGAAAAATCATAGAAATTGCTTTATTATGCAGTCAGGTATCAACTGCAAGACCAAAAATGTCTGAAGTAGTAGATTTTCTCAAAGGCAAGAGCTTACCGAACGACCTGCAACTAGCTAGGCCGACGTATTTACAATCCTCAACTACTGGTTTTTCATCCAATGCTACTGGGTCCATTTCTGTTCTATCAGTCGCCCAATCGTAA 1134 0.4065 MRLGGSSKWAVIGGVVGAVVVVLLLLALFARRWSRKQNSRGDILGATELKVPVYKYNDLKAATNNFSHGNKLGSGGYADVYKGTLREGKVVAIKKLKVDKIKEMEDDFKDEVKLMSNVHHRNLVRLLGYCSEGEERILVYEYMANNSLERLLFGNEKRSLNWKKRYDIILGTAMGLAYLHEESGMRMVHRDIKAANILLDENFQPKIADFGLAKILPEDHSQLCTRVGGTWGYTAPEYLLYRQLSEKADTYSYGVVVLEIISGQKCTSEIQHEEYHGNLLYLAWKLYERGRHLDLVDNAIDKNDYGASEVGKIIEIALLCSQVSTARPKMSEVVDFLKGKSLPNDLQLARPTYLQSSTTGFSSNATGSISVLSVAQS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01231 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Pumo7g01231 377 Gene3D Transferase(Phosphotransferase) domain 1 143 348 - -
Pumo7g01231 377 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Pumo7g01231 377 FunFam Cysteine-rich receptor-like protein kinase 2 34 142 - -
Pumo7g01231 377 Pfam Protein kinase domain 67 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01231 377 FunFam Cysteine-rich receptor-like protein kinase 2 143 345 - -
Pumo7g01231 377 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 16 358 - -
Pumo7g01231 377 Gene3D Phosphorylase Kinase; domain 1 41 142 - -
Pumo7g01231 377 CDD STKc_IRAK 72 339 - -
Pumo7g01231 377 SUPERFAMILY Protein kinase-like (PK-like) 48 337 IPR011009 -
Pumo7g01231 377 ProSiteProfiles Protein kinase domain profile. 66 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01231 377 SMART serkin_6 66 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01231 Pumo-Chr7 28940596 28943987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01231 14 370 Receptor kinase-like Gene Family AT1G56120 43.407 7.17e-90 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo7g01231 Pkinase 2.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01231 - - vun:114187094 438.728