Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01222 ATGTATTACGGATTAAGAGGCTCACCACAAGCACTGATCCTGGGGCGAGAACCTCACCCTCTCGGTCTCGTCGAAAGCGCCAAATCCTTCAAGTCCGGTGACACTACCAAGCTCCGCATCAACCGCATCCTCAACTCCACCGGCCACGCCGGCCGCGCCTGGGGAAACCACCTTGGCGTCATTGGCCTCCTCTATGCAGGCATCGAGAGCGGGATCGTGGCGGTGAGGGACACCGATGACGTCTGGAACAACGTCGCGACAGGACTCGGCACCAGCACGCTGTATCACGCTGGGAGAGGGGTACGTTCGACGACGGTGGCAGGCGTCATCATCGGCGAAGCAGGCGTTGAAACGCTACATGCGGTGATGGTGTTGGCTGGTGGTGGAGTGCGGTGCGACGATGGTGTTGACCGGAGGTGGGTTGTAGTGGTCATAGAGGGTTTGCTTGGGAGATGA 456 0.5987 MYYGLRGSPQALILGREPHPLGLVESAKSFKSGDTTKLRINRILNSTGHAGRAWGNHLGVIGLLYAGIESGIVAVRDTDDVWNNVATGLGTSTLYHAGRGVRSTTVAGVIIGEAGVETLHAVMVLAGGGVRCDDGVDRRWVVVVIEGLLGR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01222 151 Pfam Tim17/Tim22/Tim23/Pmp24 family 22 110 - -
Pumo7g01222 151 PANTHER TIM23 27 114 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01222 Pumo-Chr7 27984749 27985569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01222 22 103 Chloroplast and Mitochondria Gene Families AT1G17530 64.634 1.36e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01222 K17794 - gmx:100813158 147.517