Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01216 ATGATTCAGCTCCTAGACCACAAACTATCAAATGATGTTGTACTACTAGGGATATGGGGAATGGGAGGCATTGGTAAAACAACCATTGCAAAAGCCATTTATAATAAGATTGGTCACAATTTTGAGGGAAGGAGCTTCCTTGCACATATTAGGGAAGTTTGGGGGCAAGACGCTGGACAAGTCCATTTACAAGAACAACTTCTATTTGATATCAACAAAGAAACGAAAACAAAGATACATAACGAAAGATTTCGCCATAAGAAGGTACTTCTTATACTTGATGACGTGAATAAAATGCACCAATTGAATGCTTTCTATGGAAGTCGTGAATGGTTTGGTCCAGGGAGTAGAATAATCATCACAACTAGAGATATGCATATACTTAGAGGGAGAAGAGTTGACAAAGTGTACACAATGAAAGGAATGGATGAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCCACTCCTAGAGAAGATTTTATTGAACATTCTAGAAATGTAATTGCATATTTCGGGGGATTACTACTAGCTCTTGAAGTTCTTGGGTCCTATTTGTATGATATGGAGGTAACATAG 591 0.3739 MIQLLDHKLSNDVVLLGIWGMGGIGKTTIAKAIYNKIGHNFEGRSFLAHIREVWGQDAGQVHLQEQLLFDINKETKTKIHNERFRHKKVLLILDDVNKMHQLNAFYGSREWFGPGSRIIITTRDMHILRGRRVDKVYTMKGMDESESIELFSWHAFKQATPREDFIEHSRNVIAYFGGLLLALEVLGSYLYDMEVT 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01216 196 PRINTS Disease resistance protein signature 15 30 - -
Pumo7g01216 196 PRINTS Disease resistance protein signature 176 190 - -
Pumo7g01216 196 PRINTS Disease resistance protein signature 83 97 - -
Pumo7g01216 196 Pfam NB-ARC domain 3 190 IPR002182 GO:0043531
Pumo7g01216 196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 192 IPR027417 -
Pumo7g01216 196 Gene3D - 1 136 IPR027417 -
Pumo7g01216 196 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 192 IPR044974 GO:0006952
Pumo7g01216 196 Gene3D - 141 195 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01216 Pumo-Chr7 27671337 27671955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01216 2 190 WRKY Transcription Factor Family AT5G45050 34.715 1.10e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01216 - - gmx:100808685 331.257