Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01215 ATGTATTCCAATAACAATAATGAGGTGGAGATGGACTTTCGCCATGAACGGTACCAGGACAGAAGAAATGTTGATAAGGAGACGGCTAATAATCAGATCAACCTCCTCGTCAACCAATGGGGGGAGGGACTTTGTGAGGCTGCTGGCATCTCGAGGTTTGCAGTCCTAAATTCCAGGAATGAAAGTGAGGCTATCAAAAATATTGATGAAAATGTTACACATTTGTTAGACAAGACAGAGTTGTTCGTTGCCGATAATCCAGTAGGAGTAGAACCTCGAGTGCAAGAAATGATTCAGCTATTAGATCAAAATCAATCAAATGATGTTCTACTACTAGGGGTATGGGGGATGGGAGGCATTGGTAAAACAACTATTGCAAAAGCCATTTACAACAAGATTGGCCGCAATTTTGAGGGAAGGAGCTTCCTTGCACATATTAGGGAAGTTTGGGGGCAAGATGCTGGCCAAGTCTACTTACAAGAACAACTTCTATTTGATATCAACAAAGAAATAGGTACAAAGATATTTAACATTGAATCAGGAAAAATTATATTAAAAGAAAGACTTTGTCATAGGAGGGTACTTCTTATACTTGATGATGTGAATAAGCTGCATCAATTGAATGTTTTGTGTGGAAGTCGTGAATGGTTTGGTTCTGGGAGTAGAATAATCATCACAACTAGAGATATGCATATACTTAGAGGAAGAGTTGACAAAGTGTTTACAATGAAAGGAATGGATGAAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGCAAGTCCTAGAGAAGATTTTATCGAGCTTTCTAGAAATGTTGTTGCATATTCTGGGGGATTGCCACTAGCTCTTGAAGTCCTTGGGTCCTATTTGTTTGATATGGAGGTAACAAAGTGGATGAATGTATTGGAGAAACTCAAGAAAATTCCTAATGATGAAGTACAGGAGAAGTTAAAAATAAGCTATGATGGTTTAAGTGATGATATAGAGAAAGGAATATTCCTTGATATAGCTTGTTTCTTTATAGGAATGGACCGAAATGATGTTATACATATATTAAATGGTTGTGGACTTTGCCCAGAAAATGGAATACGTGTCTTGGTAGAGCGAAGTCTTGTAAATGTAGATGATAAAAACAAGCTTAGAATGCATGATTTGCTACGAGATATGGGAAGAGAAATCATTCGTTCAAAATCACCAATGGAGCTTGAGGAGCGTAGCAAGTTATGGTTTCATGAAGATGTGCTTGATGTATTATCAAAAGAAATTGGAACAAAAGCTATTGAGGGATTGGCTTTGAAGTTACCAAGAACTAATACAAAATGTTTGAGCACTAAAGCTTTTAAGATGATGAAAAAACTCAGGTTGCTTCAACTTGCTGGTGTAGAACTTGTTGGAAATTTTGAATATCTTTCCAGAGATCTCAGATGGCTTTGTTGGTATGGATTTCCTTTTAGATGCATACCCACAAACTTTTATCAAGGAAGTCTAGTTTCTATTGAGTTAGAAAACAGTAAGATTACAATTGCGTGGAAAGAGGCCCAGCTGATGGAGAAGCTGAAAATTCTTAATCTTAGCCATTCTCATTATCTAACAAAGACTCCAGACTTTTCAAATTTGCCTAATCTTGAAAAGCTAATACTCATAGATTGTCCAAGGTTGTCTGAGGTTTCCTATACCATTGGACATCTCAAGAAAGTTCTTCTAATAAATTTTCAAGATTGTATTAGCCTTCGTCACCTTCCAAGAAGCATCTATAGGTTGAAATCTCTTAAAACACTCATTCTTTCTGGATGTTTAAAGATTGACCAATTGGAAGAGGACTTGGAACAAATGGAGAATGAAAGTGAGGAAATAAAAAATATTGTTGAAAATGTTACACATTTGTTAGACAAGACAGAGTTGTTTGTTGTCGATAATCCAGTGGGAGTAGAATCTTGA 1950 0.3656 MYSNNNNEVEMDFRHERYQDRRNVDKETANNQINLLVNQWGEGLCEAAGISRFAVLNSRNESEAIKNIDENVTHLLDKTELFVADNPVGVEPRVQEMIQLLDQNQSNDVLLLGVWGMGGIGKTTIAKAIYNKIGRNFEGRSFLAHIREVWGQDAGQVYLQEQLLFDINKEIGTKIFNIESGKIILKERLCHRRVLLILDDVNKLHQLNVLCGSREWFGSGSRIIITTRDMHILRGRVDKVFTMKGMDEDESIELFSWHAFKQASPREDFIELSRNVVAYSGGLPLALEVLGSYLFDMEVTKWMNVLEKLKKIPNDEVQEKLKISYDGLSDDIEKGIFLDIACFFIGMDRNDVIHILNGCGLCPENGIRVLVERSLVNVDDKNKLRMHDLLRDMGREIIRSKSPMELEERSKLWFHEDVLDVLSKEIGTKAIEGLALKLPRTNTKCLSTKAFKMMKKLRLLQLAGVELVGNFEYLSRDLRWLCWYGFPFRCIPTNFYQGSLVSIELENSKITIAWKEAQLMEKLKILNLSHSHYLTKTPDFSNLPNLEKLILIDCPRLSEVSYTIGHLKKVLLINFQDCISLRHLPRSIYRLKSLKTLILSGCLKIDQLEEDLEQMENESEEIKNIVENVTHLLDKTELFVVDNPVGVES 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01215 649 Gene3D - 245 329 IPR042197 -
Pumo7g01215 649 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 621 IPR044974 GO:0006952
Pumo7g01215 649 Gene3D Ribonuclease Inhibitor 410 634 IPR032675 -
Pumo7g01215 649 SUPERFAMILY "Winged helix" DNA-binding domain 315 422 IPR036390 -
Pumo7g01215 649 SUPERFAMILY L domain-like 435 611 - -
Pumo7g01215 649 Coils Coil 598 635 - -
Pumo7g01215 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 340 IPR027417 -
Pumo7g01215 649 Pfam NB-ARC domain 92 319 IPR002182 GO:0043531
Pumo7g01215 649 SMART AAA_5 108 247 IPR003593 GO:0016887
Pumo7g01215 649 Gene3D - 69 240 IPR027417 -
Pumo7g01215 649 PRINTS Disease resistance protein signature 188 202 - -
Pumo7g01215 649 PRINTS Disease resistance protein signature 111 126 - -
Pumo7g01215 649 PRINTS Disease resistance protein signature 280 294 - -
Pumo7g01215 649 PRINTS Disease resistance protein signature 589 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01215 Pumo-Chr7 27655917 27671327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01215 39 610 WRKY Transcription Factor Family AT4G12020 33.502 8.18e-71 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01215 - - gsj:114406066 1028.85