Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01183 ATGCTGATAGAGAAAGAGATATTCGGGAGGGAAGCATTGAATGTCATAGCTTGTGAAGGGTCTGAAAGAGTGGAGAGGCCAGAGAGCTATAAGCAGTGGCAAGCACGCATTCTGCGGACCAGGTTTGTGCAACAATCTTTTGATCACGAGACAGTGAAGATGGCAATGCACAAAGTGAGGGGTAGCTACCACAAGGATTTTGTGATTGATGAAGATAGCCAGTGGTTGTTGCAAGGTTGGAAGGGGCGTATCATTTATGCCCTTTCTTGTTGGAGACCTGCATGA 285 0.4667 MLIEKEIFGREALNVIACEGSERVERPESYKQWQARILRTRFVQQSFDHETVKMAMHKVRGSYHKDFVIDEDSQWLLQGWKGRIIYALSCWRPA 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01183 94 Pfam GRAS domain family 2 92 IPR005202 -
Pumo7g01183 94 ProSiteProfiles GRAS family profile. 1 92 IPR005202 -
Pumo7g01183 94 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 86 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01183 Pumo-Chr7 26726258 26726542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01183 1 93 GRAS Transcription Factor Family AT2G37650 64.516 1.13e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo7g01183 GRAS 1.8e-21 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01183 - - gmx:100780785 184.111