Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01176 ATGGCTGAGGAGAAATCAGAGCAGTGTTGTTCGGAGAATAAGCAGCAAACTAATGCTACTTCCAGCTCTTCTGTATCAGAAGGCAGTGGCAGTGCTATACCCAAGTCATCAACGGAAAGTAAATCAGCATTGCCTTCTAATCGGAGGACCACTGGACCTGTTAGGCGCGCAAGGGGTGGTTGGACAGAAGAGGATGATGAGACATTAACGAATGCTGTTCGAGTTTATAATGGCAAGAATTGGAAGAAAATAGCTAAGTTTTTTCCGGGTAAATCAGAAGTTCAATGTCTGCACAGATGGCAAAAAGTTCTTCATCCAGAACTTGTTAAAGGACCTTGGACTCCGGAGGAGGATGATAAAATAATTGAAATGGTGTCCAAACATGGACCTCAAAAATGGTCTTTGATAGCCAAGTCTTTACCTGGTCGAATAGGAAAACAGTGCCGAGAACGATGGTGCAATCATCTTAATCCTGACATAAAGAAGGATCCCTGGACTTTGGAGGAGGAATTGGCCCTTATGGATGCTCATCGTATGCATGGCAACAAATGGGCTGAAATAGCCAAGGTTCTTCATGGAAGGACTGATAATGCAATTAAGAACCATTGGAATAGTTCTTTGAAGAAAAAGAGAGATTTCTATTCTGCTACGGGAAGATTTCCGCCCATTCCAAATAAAGGATTAGATGCTACCATTGTATCATCATCTAAAACTACAGATGTTACCAAGCTGGATAACAGTGATAAGAATCAACTAGAGTCTTCAAGAACACTTAAAGGTGATTCTTCAAATGTTCCTATGAAAGAATCTGCTGATTCTGACTGCATAGAGTGCAATAGATCATCCAACAAAGGTCTCAGCTGTAGCAACTCAGAACCATTGTCAGGAAATAATTCTAGAATAAACAATGGCAGGTTAACCAGAAATATTTATTCAAAGGAAAGTCAAACCTTTGGTTCTTTTTGTTATGAACCATCACTTCCTTTAGATTCTTTTTATTTTAATATTTCTGGCCTGCAGCAGAATGAGTTCTTTTCTCCTCCAATGATGTCACCTGTTGGTTTCTTAACTCCATCTCCTGCGAAGGAAAGTGAATTATGCTCAGAATCTCCTGAGTCAATATTGAAAAAGGCAGCTAAAACTTTCCCAACTCCTTCCATATTGAGGAAGAGAAGGAGTGTAGTCAAAAGACCTGTCACTCCTAGCGAGGTTGCAAAAGAAGTTCATGATTCACATGCTTATAATGAACAAGAGAGAACAAATGATATTTCTGGTTCTGAAGTTGTGAGGCTATCTGTGAGTCCAGCAATTCATAGCTATGGGGGTAACATTTTCCATGATAAGGCTTTCAAAACAACTTCTCCATACCGATTAAGATCCAGGCAAACAGCTATTAAGTCTCTGGAGAAACAACTTGATTCTGTATTTGACATAGAGAAGCGTGCTCATAAGATGAGAAATGTGATGACGGATAAAATTGGCAGAGACATAGTTCGTAAGTTGGACTAG 1509 0.3989 MAEEKSEQCCSENKQQTNATSSSSVSEGSGSAIPKSSTESKSALPSNRRTTGPVRRARGGWTEEDDETLTNAVRVYNGKNWKKIAKFFPGKSEVQCLHRWQKVLHPELVKGPWTPEEDDKIIEMVSKHGPQKWSLIAKSLPGRIGKQCRERWCNHLNPDIKKDPWTLEEELALMDAHRMHGNKWAEIAKVLHGRTDNAIKNHWNSSLKKKRDFYSATGRFPPIPNKGLDATIVSSSKTTDVTKLDNSDKNQLESSRTLKGDSSNVPMKESADSDCIECNRSSNKGLSCSNSEPLSGNNSRINNGRLTRNIYSKESQTFGSFCYEPSLPLDSFYFNISGLQQNEFFSPPMMSPVGFLTPSPAKESELCSESPESILKKAAKTFPTPSILRKRRSVVKRPVTPSEVAKEVHDSHAYNEQERTNDISGSEVVRLSVSPAIHSYGGNIFHDKAFKTTSPYRLRSRQTAIKSLEKQLDSVFDIEKRAHKMRNVMTDKIGRDIVRKLD 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01176 502 CDD SANT 61 104 IPR001005 -
Pumo7g01176 502 Pfam Myb-like DNA-binding domain 58 104 IPR001005 -
Pumo7g01176 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 104 IPR017930 -
Pumo7g01176 502 ProSiteProfiles Myb-like domain profile. 105 156 IPR001005 -
Pumo7g01176 502 CDD SANT 112 156 IPR001005 -
Pumo7g01176 502 Gene3D - 110 161 - -
Pumo7g01176 502 FunFam Transcriptional activator Myb isoform A 57 109 - -
Pumo7g01176 502 ProSiteProfiles Myb-like domain profile. 157 207 IPR001005 -
Pumo7g01176 502 ProSiteProfiles Myb-like domain profile. 53 104 IPR001005 -
Pumo7g01176 502 FunFam Transcriptional activator Myb isoform A 110 162 - -
Pumo7g01176 502 Gene3D - 57 109 - -
Pumo7g01176 502 Gene3D - 163 251 - -
Pumo7g01176 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 160 IPR017930 -
Pumo7g01176 502 MobiDBLite consensus disorder prediction 1 63 - -
Pumo7g01176 502 SUPERFAMILY Homeodomain-like 59 114 IPR009057 -
Pumo7g01176 502 CDD SANT 164 207 IPR001005 -
Pumo7g01176 502 PANTHER MYB PROTEIN-RELATED 57 104 - -
Pumo7g01176 502 MobiDBLite consensus disorder prediction 11 49 - -
Pumo7g01176 502 SUPERFAMILY Homeodomain-like 107 203 IPR009057 -
Pumo7g01176 502 SMART sant 161 209 IPR001005 -
Pumo7g01176 502 SMART sant 57 106 IPR001005 -
Pumo7g01176 502 SMART sant 109 158 IPR001005 -
Pumo7g01176 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 161 211 IPR017930 -
Pumo7g01176 502 Pfam Myb-like DNA-binding domain 113 171 - -
Pumo7g01176 502 MobiDBLite consensus disorder prediction 238 303 - -
Pumo7g01176 502 MobiDBLite consensus disorder prediction 276 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01176 Pumo-Chr7 26536330 26542061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01176 2 482 MYB Transcription Factor Family AT3G09370 44.531 6.87e-122 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pumo7g01176 Myb_DNA-bind_6 1.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01176 K09422 - gmx:100777236 774.622