Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01173 ATGCGATCACCATGTTGTTGCAGAGACTTCAAAAACCTTGATATCGTGGCCTCCATTGCGGTTGTGGACCGTGATTTGATGATGGGATGTGAGAATCTTGAATGGGCTCAAGGGAGAGCAGGTGAGGATCGTGTGCATATTGTGATCTCTGAGGAGCATGGGTGGGTTTTTGTGGGGATTTATGATGGGTTCAATGGTCCTGATGCTACTGATTATCTTCTTGATAATCTGTTTAATGCTGTGCATGATGAGCTCAAGGGTGGGCTATGTGGTGGTCACAGGTCTGATGAGTTCTTGGAAGAGAAAGTGTTGTTGGGTTTGGTCAAGGGGAGTGATGGATCCTCCAAATTAAGGAATAGAATGGTCAATGGTTGCTGTTGTTCTTCGGTTTTGGATAAAGAAAACTATCCACTAGCAAATGGAAAGACAAACTTGGATTCTTTGAATGTTTCAAAGACAATTGGGGGAATAAAAAGCAGAAATGGTTGTGAAGAGAAGGGGATGCAGTTAGAGTTGAGTGTTAAAGGTGCATCAACTTTTGGCCACTCAGATGTGTTGCTAGCTCTTTCTGAAGCATTGAGGAAGACTGAGGATGCATTTCTGAAGAAAGTTGATGAAGTGATAGTTAATAATCCTGTGTTGACCATGATGGGGTCTTGTGTTTTGGTGATGCTGATGAAGGGAGAAGATGTTTACTTGATGAATGTTGGAGACAGTCGTGCAGTCTTGGCTACTCAGAGTGCTAACTCTCTTCAGCTCACCATGGAGCATAGCACTCTTGTGAAAGAGGAGGTTCACAGAATCAGGAAGGAGCATCCAGATGACCCTTTTGCAATAACTAAAGGCCGGGTGAAAGGTTGCTTAAATATTACAAGAGCTTTTGGGGCTGGCTTTCTCAAGCAGCCTAAACAAAATAATGCAGTATTAGAGACTTTCAAAGTTAACTACATAGGGGACTCTCCGTACATCACATGTTCCCCTTCTCTCTACCACCACAGGCTCAGCCCTAGTGACAGATTTTTGATATTGTGTTCTGATGGACTTCACCAATACCTCACCAATGAAGAAGCAGTTGCCAAAGTGGACTCATTCATCACTTTCTCTCCAGATAGAGACCCTGCACAACTCCTCATAAATGAAGCATTATGTCGAGCAGCCAAAAAAGCTGGTATGGACTTCCATGAATTGCTTGATATCCCACAAGGGGAACGGCGTCTTTATCATGATGACATTTCTATTGTCATAATTTCCTTCAAGGGAAAAATATGGCGTTCATCAGTTTAA 1284 0.4291 MRSPCCCRDFKNLDIVASIAVVDRDLMMGCENLEWAQGRAGEDRVHIVISEEHGWVFVGIYDGFNGPDATDYLLDNLFNAVHDELKGGLCGGHRSDEFLEEKVLLGLVKGSDGSSKLRNRMVNGCCCSSVLDKENYPLANGKTNLDSLNVSKTIGGIKSRNGCEEKGMQLELSVKGASTFGHSDVLLALSEALRKTEDAFLKKVDEVIVNNPVLTMMGSCVLVMLMKGEDVYLMNVGDSRAVLATQSANSLQLTMEHSTLVKEEVHRIRKEHPDDPFAITKGRVKGCLNITRAFGAGFLKQPKQNNAVLETFKVNYIGDSPYITCSPSLYHHRLSPSDRFLILCSDGLHQYLTNEEAVAKVDSFITFSPDRDPAQLLINEALCRAAKKAGMDFHELLDIPQGERRLYHDDISIVIISFKGKIWRSSV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01173 427 Gene3D - 16 424 IPR036457 -
Pumo7g01173 427 PANTHER PROTEIN PHOSPHATASE 2C 33 417 IPR015655 GO:0004722|GO:0006470
Pumo7g01173 427 Pfam Protein phosphatase 2C 175 388 IPR001932 -
Pumo7g01173 427 CDD PP2Cc 183 418 IPR001932 -
Pumo7g01173 427 SUPERFAMILY PP2C-like 39 419 IPR036457 -
Pumo7g01173 427 ProSiteProfiles PPM-type phosphatase domain profile. 26 418 IPR001932 -
Pumo7g01173 427 SMART PP2C_4 26 416 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01173 Pumo-Chr7 26520335 26523235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01173 12 427 PP2C-type Phosphatase Gene Family AT2G28890 50.652 6.93e-146 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01173 - K01102 gmx:100794388 530.791