Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01171 ATGTCTCGAGCAGGGTCATCAAGATGGTGTCCAAGCAGAGAGCAACTCATGATCTTGGAGGAACTATACAGGAGTGGGATTAGAACTCCCAGTGCTTCCCAAATTCAGCACATAACAAACCACCTTTCTTCCTATGGCAGCATAGAAGGAAAGAACGTGTTCTATTGGTTTCAGAACCGCAAGACAAGGGATAGACAAAAGCTCAGGAGGAAACTCAACAAGCAGCTGCAGCTACAGCAACAAGTACTTCAAGTCCATCATTGCCAAATGAACCATAGTAAATGTCACTATTTTGGTTTTCCCACACAAAAAGCTTCTTTCAATAACTCAGCTAGCTTGCCTTTTCAGGGAGTAGCTGCAGATGCAACAGAACATGCAACACATTGCAAATGGTGGAGTGTGCATAATCCACAAAGCTTGTTGGAGCTAACACAGATAACTTTCAGCAACTATGATTGCACATTGGTTGATGTTAATCAAGCTTCCTCGTGTTGCACACGACCTCTCAAAACTCTTGATCTATTTCCAGTCACAAGTGACAAATTAGAAGACTGA 555 0.427 MSRAGSSRWCPSREQLMILEELYRSGIRTPSASQIQHITNHLSSYGSIEGKNVFYWFQNRKTRDRQKLRRKLNKQLQLQQQVLQVHHCQMNHSKCHYFGFPTQKASFNNSASLPFQGVAADATEHATHCKWWSVHNPQSLLELTQITFSNYDCTLVDVNQASSCCTRPLKTLDLFPVTSDKLED 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01171 184 CDD homeodomain 8 67 IPR001356 GO:0003677
Pumo7g01171 184 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Pumo7g01171 184 Gene3D - 1 67 - -
Pumo7g01171 184 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Pumo7g01171 184 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 181 IPR044555 GO:0003700|GO:0099402
Pumo7g01171 184 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Pumo7g01171 184 SMART HOX_1 4 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01171 Pumo-Chr7 26485936 26486888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01171 1 74 Wox Gene Family AT2G28610 75.676 7.49e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pumo7g01171 Homeodomain 2.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01171 - - gmx:102663963 191.815