Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01128 ATGCACACAGGATGCACATTCAACCATCGATATGTGAAGTCCAATCCTCCTGAAGCAGAGAATGCAACTTGGATGCTCACTGTATTTCATTGCTTTGGCCAATACTTCTGCCTTCACTTCGAAGCTTTCCAGCTTGGCATGGCTCCTGTTTACATGGCCTTCCTTCAATTTATGGGTCCAGATTCTCCATACTGCAGTGCACCATTTAGCATACCAGCCCTCCCTGCGTGA 231 0.4719 MHTGCTFNHRYVKSNPPEAENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLQFMGPDSPYCSAPFSIPALPA 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01128 76 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 8 65 IPR008974 GO:0005515
Pumo7g01128 76 Pfam Seven in absentia protein family 1 61 IPR018121 GO:0005737|GO:0006511|GO:0007275
Pumo7g01128 76 SUPERFAMILY TRAF domain-like 5 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01128 Pumo-Chr7 23397243 23401012 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01128 1 62 C3H Transcription Factor Family AT2G41980 83.871 8.47e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01128 K04506 - ncol:116267310 132.494