Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01115 ATGGGTTTTCTAACTCACATTAATTACTTGTTGATTTTTTTGCACATATTTTCCAGCTTCTATTTGGGTGTAAGTGCTGTGAATGACACCATCACATCAACCAGATTCATCAGGGACTCGGAGACAATAAGCTCAAGCAACGGTGACTTCAGGCTTGGATTCTTCAGCCCTGAAAAATCCACACATCGCTATGTGGCAATCTGGTATCTCTCTGAAACCTACATCATATGGATAGCCAATAGAGACCAACCACTTAATGATTCATCTGGGGTGTTCAAAATTCACAAGGATGGGAATCTTGTGGTAGTGAATGCACAAAATAGGGTCATATGGTCAACAAATGTGTCAATTAGTGCTTCCAATACAACTGCTCAACTTGATGATAGAGGAAATCTTATCCTGCGTGATGTCACAAATGGAGAATCAATATGGGACAGTTTCACACACCCTGCTGATATTGCAGTGCCATCTATGAAGATTTCTGCCAACAAGCTCACAGGTGAGAAAATTGAGTATGTGTCATGGAAAAACAGTTCTGATCCTTCTTCTGGGTACTTCACTGGGAGCCTCGAACGCTTGGATGCTCCAGAGGTGTTTTTTTGGTACAACAAAACAAAGCCATATTGGAGAACTGGTCCATGGAATGGAAGGGTCTTCCTTGGGTCACCAAGGATGTTAACTGAGTACCTATATGGGTGGCGTTTTGAGCCTAATGATAATGGATCTGCTTATCTGACCTACAATTTTGAAAATCCTTCCATGTTTGGAATCCTGACAATAACTTCACATGGCACACTTAAGTTGGTAGAGTTTATGAACAGAACAAAATTTCTGGAACTTGAGGTGGATCAAAACAAATGTGACTTTTATGGGACATGTGGGCCTTTTGGAAGCTGTGATAACTCAACATTACCAATTTGCAGCTGTTTTGAGGGGTTTGAGCCCAGCAATCCAGAGGAATGGAGCAGGGAAATTTGGACTAGTGGGTGTGTGAGGAATGTGCCACTGAATTGTGGCAAGTTGAATAATGGGAGTGATGTTCAACAAGATGGGTTTCGGGTGTACCATAATATGAAAGTGCCTGACTTTGCAAAGAGATTATTAGATGGTGACCAAGACAGATGCAGAACAAGTTGCTTAGCAAATTGCTCTTGCTTGGCATATGCATATGATCCTTACATTGGTTGCATGTATTGGGATAGGGACTTGATTGATTTGCAGAAATTTCCAAGTGGAGGGGTTGATCTCTTCATTCGTGTGCCACCACAACTTCTAGTTCAAGCTGGTGGTGGTAAAAAGGGAAGAGAAAACATGGGATTAATCATTGGCATTATTACTGTGGCAATTGGAGCATTAATCATAGCCGTCAGTGCTTATCTTTTGTGGAGGAAGTTTACTACTAAGCATACAGGAAGTCAGCTTCAAAACTTGATTACTGGAGACCAAAAACAAATTAAACTGGAAGAGCTGCCACTATTTGAATTTGAAAAGCTAGCAACTGCTACAAACAACTTTCACTTGGCCAATATGCTTGGCAAGGGAGGTTTTGGTCCAGTTTACAAGGGGCAATTGGATAACGGCCAAGAAATTGCTGTGAAAAGACTTTCAAAAGCATCTGGACAAGGATTAGAAGAATTCATGAATGAAGTAGTGGTGATTGCTAAACTTCAACATCGCAATCTAGTAAGACTTCTAGGTTGTTGTATAGAACGAGATGAGCAGATGTTGGTCTATGAGTTTATGCCAAATAAAAGTTTGGATTCATTTCTCTTTGATCCACTCCAAAGGAAAGTACTAGATTGGAAAAAACGCTTCAAAATAATTGAAGGAATAGCTCGAGGAATACTTTATCTTCATAGAGACTCAAGACTAAAGATTATACATAGAGATCTTAAAGCAAGCAACATCTTACTAGATGATGAGATGAATCCCAAAATATCAGACTTTGGCTTAGCTAGAATTGTTAGAGGTGGTGACGATGATGAAGCTAACACAAGAAGGGTTGTTGGAACTTATGGTTATATGCCGCCTGAATATGCAATGGAGGGAATTTTCTCAGAAAAATCAGATGTCTATAGCTTTGGAGTGTTGTTGCTAGAGATTGTAAGCGGACGAAGAAACACTAGCTTTTATAACAATGAGCAATCACTTAGCCTTGTTGGATATGCATGGAAACTATGGAATGAAGGAAACGTTATGTCTATAATAGATTCAGAGATACAGGATCCAATGTTCGAAAAGAGCATATTGAGGTGCATACATATAGGACTTTTATGTGTGCAAGAACTTACAAAAGAAAGACCAGCTATATCCACTGTGGTTTTGATGCTCATAAGTGAGATTACACATCTTCCTCCTCCAAGGCAAGTTGCATTTGTTCAAAAACAAAATTGCCAAAGTTCGGAATCTTCTCAGAAAAGTCAATTTAGCTCAAACAACAATGTAACTATAAGTGAAATTCAAGGCAGATAA 2472 0.3948 MGFLTHINYLLIFLHIFSSFYLGVSAVNDTITSTRFIRDSETISSSNGDFRLGFFSPEKSTHRYVAIWYLSETYIIWIANRDQPLNDSSGVFKIHKDGNLVVVNAQNRVIWSTNVSISASNTTAQLDDRGNLILRDVTNGESIWDSFTHPADIAVPSMKISANKLTGEKIEYVSWKNSSDPSSGYFTGSLERLDAPEVFFWYNKTKPYWRTGPWNGRVFLGSPRMLTEYLYGWRFEPNDNGSAYLTYNFENPSMFGILTITSHGTLKLVEFMNRTKFLELEVDQNKCDFYGTCGPFGSCDNSTLPICSCFEGFEPSNPEEWSREIWTSGCVRNVPLNCGKLNNGSDVQQDGFRVYHNMKVPDFAKRLLDGDQDRCRTSCLANCSCLAYAYDPYIGCMYWDRDLIDLQKFPSGGVDLFIRVPPQLLVQAGGGKKGRENMGLIIGIITVAIGALIIAVSAYLLWRKFTTKHTGSQLQNLITGDQKQIKLEELPLFEFEKLATATNNFHLANMLGKGGFGPVYKGQLDNGQEIAVKRLSKASGQGLEEFMNEVVVIAKLQHRNLVRLLGCCIERDEQMLVYEFMPNKSLDSFLFDPLQRKVLDWKKRFKIIEGIARGILYLHRDSRLKIIHRDLKASNILLDDEMNPKISDFGLARIVRGGDDDEANTRRVVGTYGYMPPEYAMEGIFSEKSDVYSFGVLLLEIVSGRRNTSFYNNEQSLSLVGYAWKLWNEGNVMSIIDSEIQDPMFEKSILRCIHIGLLCVQELTKERPAISTVVLMLISEITHLPPPRQVAFVQKQNCQSSESSQKSQFSSNNNVTISEIQGR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01115 823 CDD STKc_IRAK 511 777 - -
Pumo7g01115 823 SUPERFAMILY Protein kinase-like (PK-like) 490 799 IPR011009 -
Pumo7g01115 823 Pfam Protein tyrosine and serine/threonine kinase 506 774 IPR001245 GO:0004672|GO:0006468
Pumo7g01115 823 ProSiteProfiles Protein kinase domain profile. 505 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01115 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 147 - -
Pumo7g01115 823 Gene3D Phosphorylase Kinase; domain 1 479 580 - -
Pumo7g01115 823 CDD B_lectin 34 150 IPR001480 -
Pumo7g01115 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Pumo7g01115 823 Pfam PAN-like domain 348 406 IPR003609 -
Pumo7g01115 823 FunFam receptor-like serine/threonine-protein kinase SD1-8 478 580 - -
Pumo7g01115 823 Pfam S-locus glycoprotein domain 209 316 IPR000858 GO:0048544
Pumo7g01115 823 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Pumo7g01115 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 216 IPR036426 -
Pumo7g01115 823 Gene3D Transferase(Phosphotransferase) domain 1 581 785 - -
Pumo7g01115 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 768 - -
Pumo7g01115 823 SMART ntp_6 347 420 IPR003609 -
Pumo7g01115 823 MobiDBLite consensus disorder prediction 802 823 - -
Pumo7g01115 823 Gene3D - 23 149 IPR036426 -
Pumo7g01115 823 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Pumo7g01115 823 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Pumo7g01115 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Pumo7g01115 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 785 - -
Pumo7g01115 823 SMART blect_4 34 150 IPR001480 -
Pumo7g01115 823 Pfam D-mannose binding lectin 75 176 IPR001480 -
Pumo7g01115 823 CDD PAN_AP_plant 334 421 - -
Pumo7g01115 823 SMART serkin_6 505 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01115 Pumo-Chr7 22096502 22104375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01115 418 795 Receptor kinase-like Gene Family AT4G05200 51.444 4.20e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo7g01115 PK_Tyr_Ser-Thr 5.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01115 - - gmx:100811896 1509.2