Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01113 ATGGCGACCCCTCCAAACGACGCCGCATCGGCCAAGAAGCCCCAGCCCATCCCCTGGACCCACCAGGAGACCGTCCACCTCATCCGCGCCTACCAGGAGAAGTGGTACGCCCTCAAGCGGGGCCCACTCCGCCACAACCAGTGGGAGGAGGTCGCCGTCGTCGTCGCCGCCCGCTGCGGCTACGACCTCGCCCACCCCGCCAAGTCCGCCCTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCCAGCGCCACCGCGCCGAGAAGAAACACTCCGCCGCCGCCGCCGCCACGACTCTCCGCCACGGCGCGTGGCAGTACAACGGCCTCATGGACGACCTCGAGCGCGGGCCCCTCCCCATCTCCGCCCTCGCCCCTCTCCAAAACGACGACGACGACACCGACAACGACAGCACCGACGATGAAAACGGCAACACTGCTTATCAAAACGACAACAACGATGAGGGATTTATTAACATAAAGTCGAAGAGCATCAATTGTATTCTCAGCGAGAGGCCCGTGAGAGTGAGGACTAGTGAAAGAGGGTTTTTGAGAGAGCGTGTTGTTGTTGAAGAAGAGGAGGACGACGAGGACGACGGCGTTTTGGGGTTGTCCGCGGAGATGAGGGCTTTTGCGGAGAGGTTTATTGGAATGGAGAGTTTGAAGATGGAGATGATGAAGGAGACGGAGAGGTGTAGGTTGGAGATGGAGAAGAAGCGGATCCAGATGATTCTGGAATCGCAGCGGAGGATCGTTGATTCCATTGGGAGGGCGTTTGGGTCTAACAAGAGGATCAAGATTACTCAACAAAACTGA 813 0.5904 MATPPNDAASAKKPQPIPWTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVVVAARCGYDLAHPAKSALQCRHKMEKLRQRHRAEKKHSAAAAATTLRHGAWQYNGLMDDLERGPLPISALAPLQNDDDDTDNDSTDDENGNTAYQNDNNDEGFINIKSKSINCILSERPVRVRTSERGFLRERVVVEEEEDDEDDGVLGLSAEMRAFAERFIGMESLKMEMMKETERCRLEMEKKRIQMILESQRRIVDSIGRAFGSNKRIKITQQN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01113 270 MobiDBLite consensus disorder prediction 140 154 - -
Pumo7g01113 270 FunFam Trihelix transcription factor ASIL2 19 86 - -
Pumo7g01113 270 Pfam Myb/SANT-like DNA-binding domain 18 107 IPR044822 -
Pumo7g01113 270 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 254 IPR044823 -
Pumo7g01113 270 ProSiteProfiles Myb-like domain profile. 18 81 IPR001005 -
Pumo7g01113 270 Gene3D - 19 86 - -
Pumo7g01113 270 MobiDBLite consensus disorder prediction 120 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01113 Pumo-Chr7 22017014 22019197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01113 19 88 Trihelix Transcription Factor Family AT3G14180 31.429 1.14e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pumo7g01113 Myb_DNA-bind_4 9.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01113 - - gmx:100810821 400.208