Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01108 ATGGACTTGAGGAATGCATGGGCTGGCTTCTTTCTGTTTTGTAGCTTCTGGCTTGTCACTTTCTGTGAACAAGATGGTTTCTTGAGTCTTTCTTGTGGTGGAAGAACAAGTTTCAGGGATTCATCTAGCATTTCATGGGTACCAGACACCACCTACATAACCTCAGGCAAGACTACCACCATCACTTACAGTGATGGCTCCTCCTCATTGAACATCTCAGCGCGGTTCTTCCCGAATTCCAGAAGGCGAAAATGTTACAGAATACCAGCCAACAATTCAACAACTTTGGTTCTGGTTAGAGCAAAATTTGTGTACAAGAACTATGATGGACTTGGGAAACCACCTAAGTTCTCTGTTTCTATTGGGACAGCTATTGCTGCAACCATTAATCTTGCTGAATCTGATCCATGGAGTGAAGAGTTTCTATGGACTGTCAACAAGGATACACTGTCATTCTGCTTAAATGCAATTCCAAAAGGTGGTTCACCAGTAATTTCTTCCCTTGAAATCAGACCACTTCCTCAAGGAGCCTACACAAATGGCATGACAGATTTTCCTAATAAGTTGCTTAGGAAGAGTTATAGAATTGATTGTGGACACTCCAATGATTCTATAAGGTATCCCTTGGATCCATTTGATAGAATATGGGATGCTGATAGAAGTTTCACACCCTTTCATGTTGCAACTGGGTTTAAGATTCAACTTAGCTTCAAACAGTCTAGTCTTGTGGAAGAACCACCAGCAGCTGTTCTTCAAACTGGGAGAGTTTTGGCTCGAAGAAATACGCTGACATACAGCCTCCCTCTTGATGAATTAGGGGACTACTACATCATCCTCTACTTTGCTGGAATTCTTCCTGTCTTCCCCTCATTTGATGTCCTTATAAATGGAGAAGTAGTAAAATCAAACTACACAATAAATAGCTCAGAAACCAGTGCTTTATACGTAACGCGAAAGGGAATTGGGAGCTTGAATATAACATTGAAGAGTATCAGCTTTTACCCTCAGATCAATGCATTTGAGGTTTATAAGATGGTTGATATTCCATCTGATGCATCCTCAACTACAGTTTCAGCACTCCAGGTTATTCAGCAGTCCACTGGATTGGATCTTGGATGGCAGGATGATCCATGCCTTCCTTCCCCATGGGAGAAAATTGACTGTGAAGGAAGCCTTGTTACATCATTGGATCTTTCAGACATAAATTTAAGATCAATTAGTCCTACATTTGGCGACTTGTTAGACCTTAAAACATTGGATTTGCACAACACGTCGCTTACTGGTGAAATACAGAATTTGGATGGCTTGCAACATCTTGAGAAACTTGTAATGCCTCTAAAGAGCATGAACTTGAATGTTGGTTTTGTGCAAAGTAGGCTAATAACTGCTCAACTTTTCAGGAACCTGAGTTTCAATAAACTAACATCCATTGGTGCAGATCTGGAGAACTTGATTAACCTTCAAATATTAGACTTGCAGAACAATAATCTAATGGGAGTAGTGCCTGATAGCTTGGGAGAGTTAGAGGACCTCCACTTACTGAATCTGGAAAACAACAAACTACAAGGTCCACTACCACAGTCTTTGAACAAAGAAACACTAGAGATCTGGACATCTGGTAATTTGTGTCTTACCTTTTCCACAACATCATGTGATGATGCATCATCCAATCCTCCAATTGAGGCACCACAAGTCACTGTAGTTCCTCAGAAGAAGCACAATGTACATAACCATCTAGCAATCATATTAGGCATGGTTGGAGGAGCCACACTAGTCTTTCTCTTAATGTGTATTTTGGTAATGATATACAAGACTAAGCAGCAATATGCAGCCTCCCACACATCAAGGGCAGAAATGGATATGAGGAACTGGGGTGCTGCAAAAGTCTTTTCCTACAAAGAAATCAAAGTAGCTACAAGAAACTTCAAAGAAGTCATAGGAAGGGGCAGTTTTGGATCTGTTTATCTTGGAAAACTTCCAGATGGAAAATCTGTGGCTGTCAAAGTTCGGTTTGACAAATCTCAATTGGGTGCTGATTCTTTCATCAATGAGGTTAATCTTTTGTCAAAAATCCGGCATCAAAATCTAGTGTCTTTGGAAGGATTTTGTCATGAAAGAAAGCATCAGATATTAGTTTATGAGTACTTGCCTGGTGGATCCCTGGCTGATCACCTCTATGGTACAAACAGTCAAAAAACTTCCTTAAGCTGGGTTCGAAGGTTGAAAATTGCAGTTGATGCAGCAAAAGGATTGGACTATTTGCACAATGGAAGTGAACCACGAATCATACACCGTGATGTCAAGTGCAGTAACATCCTCTTGGATATGGATATGAATGCCAAGGTCTGTGACTTAGGTCTCTCTAAGCAAGTAACTCAGGCAGATGCAACTCATGTCACCACTGTTGTCAAGGGCACTGCTGGTTACCTCGATCCAGAGTATTATTCCACTCAACAATTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTATTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCACTCTGGAACTCCTGACTCATTCAATTTGGTGTTATGGGCCAAGCCATACTTGCAGGCTGGTGCATTTGAGATTGTGGATGAGGACATAAGAGGAAGTTTTGATCCCTTGAGTATGAGGAAGGCAGCTTTCATTGCTATAAAGTCAGTGGAGAGAGATGCATCAGAGAGGCCATCTATTGCAGAGGTATTAGCAGAGCTAAAGGAAGCCTACAATATTCAGCTCAGATTCCTTGAATCTTGTCAAAATGAGAATTGA 2790 0.4093 MDLRNAWAGFFLFCSFWLVTFCEQDGFLSLSCGGRTSFRDSSSISWVPDTTYITSGKTTTITYSDGSSSLNISARFFPNSRRRKCYRIPANNSTTLVLVRAKFVYKNYDGLGKPPKFSVSIGTAIAATINLAESDPWSEEFLWTVNKDTLSFCLNAIPKGGSPVISSLEIRPLPQGAYTNGMTDFPNKLLRKSYRIDCGHSNDSIRYPLDPFDRIWDADRSFTPFHVATGFKIQLSFKQSSLVEEPPAAVLQTGRVLARRNTLTYSLPLDELGDYYIILYFAGILPVFPSFDVLINGEVVKSNYTINSSETSALYVTRKGIGSLNITLKSISFYPQINAFEVYKMVDIPSDASSTTVSALQVIQQSTGLDLGWQDDPCLPSPWEKIDCEGSLVTSLDLSDINLRSISPTFGDLLDLKTLDLHNTSLTGEIQNLDGLQHLEKLVMPLKSMNLNVGFVQSRLITAQLFRNLSFNKLTSIGADLENLINLQILDLQNNNLMGVVPDSLGELEDLHLLNLENNKLQGPLPQSLNKETLEIWTSGNLCLTFSTTSCDDASSNPPIEAPQVTVVPQKKHNVHNHLAIILGMVGGATLVFLLMCILVMIYKTKQQYAASHTSRAEMDMRNWGAAKVFSYKEIKVATRNFKEVIGRGSFGSVYLGKLPDGKSVAVKVRFDKSQLGADSFINEVNLLSKIRHQNLVSLEGFCHERKHQILVYEYLPGGSLADHLYGTNSQKTSLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMDMNAKVCDLGLSKQVTQADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVILELICGREPLTHSGTPDSFNLVLWAKPYLQAGAFEIVDEDIRGSFDPLSMRKAAFIAIKSVERDASERPSIAEVLAELKEAYNIQLRFLESCQNEN 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01108 929 Gene3D Phosphorylase Kinase; domain 1 602 715 - -
Pumo7g01108 929 SUPERFAMILY L domain-like 375 531 - -
Pumo7g01108 929 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 716 922 - -
Pumo7g01108 929 SUPERFAMILY Protein kinase-like (PK-like) 620 911 IPR011009 -
Pumo7g01108 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Pumo7g01108 929 CDD STKc_IRAK 646 913 - -
Pumo7g01108 929 SMART serkin_6 640 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01108 929 Gene3D Ribonuclease Inhibitor 356 553 IPR032675 -
Pumo7g01108 929 Coils Coil 922 929 - -
Pumo7g01108 929 FunFam serine/threonine-protein kinase PBS1-like 607 715 - -
Pumo7g01108 929 Pfam Protein kinase domain 642 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01108 929 PANTHER OS07G0107800 PROTEIN-RELATED 468 915 - -
Pumo7g01108 929 ProSiteProfiles Protein kinase domain profile. 640 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01108 929 Gene3D Transferase(Phosphotransferase) domain 1 716 925 - -
Pumo7g01108 929 Gene3D - 192 347 - -
Pumo7g01108 929 Pfam Malectin-like domain 30 345 IPR024788 -
Pumo7g01108 929 ProSitePatterns Protein kinases ATP-binding region signature. 646 668 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01108 Pumo-Chr7 21900672 21909980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01108 10 924 Receptor kinase-like Gene Family AT5G48740 61.311 0.0 1098
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pumo7g01108 Malectin_like 2.7e-54 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01108 - - gmx:100812804 1673.68