Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01107 ATGTCTCTTCCAAGACCCAGTGAGGGTCAAGCCCCTTCTCAGCTGAATGAAGGAGTAGCACCTGCTGCTGCTGCTGCTGCAGCCTCATCCTCTTCTTCATGGAATAATAGGCTACAACACACTTTCCCTCCTTTATCTCTACACAACAAGAGTAGCAAAATTGAAGACAGTGATGAAGATATGTTCACAGTTCCAGATGTTGAGGCCACACCAGTTAGTGTTCATTCTGCAGTGAATCTTTCAAATAGTAACCTTAATCAACGTAATGTGACAGACCCTCAATTTCAAACTGGCTTTCCTGGAAAGCGCCGCAGGGGAAGAAACCCTGCAGATAAGGAACATAGACGCCTCAAGAGGTTGTTGCGAAACAGGGTCTCTGCTCAACAAGCCCGCGAAAGAAAGAAGGTTTATGTGAATGACTTGGAATCAAGAGCTAAAGAGATGGAAGAAAAAAACGCTATCTTAGAAGAGCGTATCTCTACTTTAATCAATGAGAACACCATGCTGCGGAAGGTTCTTATGAACGCGAGGCCAAAAGTTGATGATAGCATTGAACAAAAGCAAGACCAGTTAAGTAAGAGCTAA 585 0.4393 MSLPRPSEGQAPSQLNEGVAPAAAAAAASSSSSWNNRLQHTFPPLSLHNKSSKIEDSDEDMFTVPDVEATPVSVHSAVNLSNSNLNQRNVTDPQFQTGFPGKRRRGRNPADKEHRRLKRLLRNRVSAQQARERKKVYVNDLESRAKEMEEKNAILEERISTLINENTMLRKVLMNARPKVDDSIEQKQDQLSKS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01107 194 SUPERFAMILY Leucine zipper domain 115 174 IPR046347 GO:0003700|GO:0006355
Pumo7g01107 194 MobiDBLite consensus disorder prediction 26 50 - -
Pumo7g01107 194 Coils Coil 131 165 - -
Pumo7g01107 194 CDD bZIP_HY5-like 125 166 - -
Pumo7g01107 194 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 113 176 IPR004827 GO:0003700|GO:0006355
Pumo7g01107 194 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 21 190 IPR044280 GO:0000981|GO:0045944
Pumo7g01107 194 MobiDBLite consensus disorder prediction 84 113 - -
Pumo7g01107 194 Pfam bZIP transcription factor 112 171 IPR004827 GO:0003700|GO:0006355
Pumo7g01107 194 MobiDBLite consensus disorder prediction 1 58 - -
Pumo7g01107 194 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 118 133 IPR004827 GO:0003700|GO:0006355
Pumo7g01107 194 FunFam Transcription factor HY5 134 175 - -
Pumo7g01107 194 Gene3D Single helix bin 134 175 - -
Pumo7g01107 194 SMART brlzneu 111 175 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01107 Pumo-Chr7 21890481 21895218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01107 94 183 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 73.626 1.83e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo7g01107 bZIP_1 6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01107 K16241 - gmx:778143 335.495