Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01098 ATGTCGCAGCCGCAGCCGCAGACGCAGAGTCAGGTGCTGGAGCAGGTGCAATGCTTCGGCCGCAAGAAGACCGCGGTGGCCGTGACCTACTGCAAGCGCGGGCGCGGGCTCATCAAGATCAACGGCTGCCCGATCGAGCTCGTGGAGCCCGAGATCCTCCGCTTCAAGGCCTTCGAGCCCATCCTCCTGCTGGGGAAGAGCCACTTCGCCGGCGTCGACATGCGCATCCGCGTCAAGGGCGGCGGCCACACCTCCCAGATCTACGCCATCCGCCAGAGCATCGCCAAGGCCCTCGTCGCGTTCTACCAGAAGTACGTCGACGAACAGAGCAAGAAGGAGATCAAGGACATTCTCGTTAGGTACGATCGCACGCTTCTCGTTGCTGACCCCAGGCGCTGCGAGCCCAAGAAGTTCGGCGGGCGCGGCGCACGTGCGAGGTTCCAGAAGTCTTACCGTTGA 459 0.6362 MSQPQPQTQSQVLEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKSHFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01098 152 Gene3D - 7 152 IPR014721 -
Pumo7g01098 152 Pfam Ribosomal protein S9/S16 20 152 IPR000754 GO:0003735|GO:0005840|GO:0006412
Pumo7g01098 152 ProSitePatterns Ribosomal protein S9 signature. 80 98 IPR020574 GO:0003735|GO:0005840|GO:0006412
Pumo7g01098 152 PANTHER RIBOSOMAL PROTEIN S9 5 149 IPR000754 GO:0003735|GO:0005840|GO:0006412
Pumo7g01098 152 FunFam 40S ribosomal protein S16 8 152 - -
Pumo7g01098 152 SUPERFAMILY Ribosomal protein S5 domain 2-like 15 152 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01098 Pumo-Chr7 21416691 21417149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01098 5 152 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 85.811 2.68e-91 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01098 K02960 - gmx:100779794 291.967