Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01089 ATGTGCCAGTTGATTGCGAAATACTGGACAATTCTCGACACACCTGTTATTGGAGATGGGTTTATAGCACAAGACATCACATTTAGAAACACAGCTGGTGCAGCAAACCACCAAGCTGTTGCATTGCGTTCTGGATCAGACCTATCAGTATTTTACAGATGCAGCTTTGAAGGTTACCAAGACACTTTATATGTGTATTCCGATAGACAATTCTATAGAGAATGTGACATATATGGCACAGTTGACTTCATCTTTGGTAATGCTGCTGTGGTGTTCCAAAACTGTAACATATATGCAAGAAACCCTCCAAACAAAGTTAACACAATCACTGCTCAAGGAAGAACCGATCCAAACCAGAACACTGGCATTTCCATTCACAACTCAAAGGTTATTGCTGCCTCGGACTTGAAGGGGATTCAAAGCTCAGTTAGGACATACCTTGGAAGGCCTTGGAAACAATACTCAAGAACAGTTTTCATGAAGACTTATCTTGATAGTTTGATCAATCCAGCGGGTTGGTTGGAATGGAGTGGTAACTTTGCATTGAGTACTTTGTATTATGGAGAATACATGAACACAGGACCAGGTTCCTCAACCGCAAACCGAGTTAAGTGGTTGGGATATCATGTCATTACAAGTGCTTCTGAAGCCTCAAAATTCACCGTTGGTATTTCATTGCTGGAAACTCGTGGTTACCATCCACTGGCGTGCCTTTCACCTCTAGTTTATAAGTAA 735 0.415 MCQLIAKYWTILDTPVIGDGFIAQDITFRNTAGAANHQAVALRSGSDLSVFYRCSFEGYQDTLYVYSDRQFYRECDIYGTVDFIFGNAAVVFQNCNIYARNPPNKVNTITAQGRTDPNQNTGISIHNSKVIAASDLKGIQSSVRTYLGRPWKQYSRTVFMKTYLDSLINPAGWLEWSGNFALSTLYYGEYMNTGPGSSTANRVKWLGYHVITSASEASKFTVGISLLETRGYHPLACLSPLVYK 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01089 244 PANTHER PECTINESTERASE 16 223 - -
Pumo7g01089 244 ProSitePatterns Pectinesterase signature 2. 77 86 IPR033131 -
Pumo7g01089 244 SUPERFAMILY Pectin lyase-like 16 223 IPR011050 -
Pumo7g01089 244 Gene3D - 10 233 IPR012334 -
Pumo7g01089 244 FunFam Pectinesterase 4 5 232 - -
Pumo7g01089 244 Pfam Pectinesterase 16 223 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01089 Pumo-Chr7 20790066 20793053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01089 17 226 Carbohydrate Esterase AT2G45220 76.190 1.85e-118 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01089 K01051 - egr:104444379 405.986