Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01087 ATGGCAGTGAAAGCTGAGATTGTATCTAGAGACACAATAAAGCCATCTTCTCCAACCCCTGAAAATCTTGGTCACTTCAAACTCTCCCTCCTTGATCAATTGGCTCCTCCATTTTATGTTCCTATTCTCCTCTTTTACTCTGCCTATGATGTTGGCACAGACTTCAAAGCAATATCTCACAAGTTGAAGGCTTCTTTATCAGATGTTCTCACTATCTATCACCCCTTTTGTGGAACACTCAGAGGCAATTCAACAGTTGAGTGCAACGATGAGGGTGTTCTTTACATCGAGTCTAGAGTTTCTATTGAGCTCTCAAACTTTCTGAAGAACCCTCAACTTCACGAGATCAATGAACTTTTTCCCTGTGATCCCTACAACCCTGCAAGGGAAACAGTACTAGGGAACATGGCTATTCAGTTGAACCAGTTCAAGTGTGGGGGTGTAGCACTTGGCGTGTGCTTCTCACACAAGATCGCTGATGCTTCAACAGCAGCATCGTTCCTCAACGCTTGGGCCGCCACATCAAGGAAAGAAAACAATAACAAATTAGTACCACCTCAAATGGAAGAAGGGGCGCTGCTATTCCCGCCGAGGAACATAGAAATGGACATGACACGCGGCATGGTCGGCGACATGAACATCGTGACAAAGAGGTTCGTGTTTAACGGTTCCAACATATCTAAACTGAGGCAAAAACTGGGATGCTTCAATTTCAATCCCACGCGTGTAGAAGCCGTGACAGCACTCGTATGGAAATCATCGTTGGAAGCAGCAAAAGCAAGCTCAGGAGAAAGAAAATTCCCCGCATCAATGATATCGCACGCGGTGAACATTCGCAGCAGAATAATGGCCTCACCAAAGCATTGTTCAATTGGAAATCTATGGCAACAAGCGGTGTCTCAGTTGGTGGAGGTGGAAGAAGAAGAAATGGGGCTGCGTGATTTGGCTGAGAGAGTGAGAAAAACAATAAGAAAAGTTGATGGAAACTATGTGAGTAAACTTCAGGGTCTTGAGTTTTTTAAGGTGATTGAGTCTTTGAATGAAGCAAGGATAATGGACATCACAAAAGGGTGTTCCAGTGTTATAGCTTTAGTAGTTGGGTGA 1104 0.4429 MAVKAEIVSRDTIKPSSPTPENLGHFKLSLLDQLAPPFYVPILLFYSAYDVGTDFKAISHKLKASLSDVLTIYHPFCGTLRGNSTVECNDEGVLYIESRVSIELSNFLKNPQLHEINELFPCDPYNPARETVLGNMAIQLNQFKCGGVALGVCFSHKIADASTAASFLNAWAATSRKENNNKLVPPQMEEGALLFPPRNIEMDMTRGMVGDMNIVTKRFVFNGSNISKLRQKLGCFNFNPTRVEAVTALVWKSSLEAAKASSGERKFPASMISHAVNIRSRIMASPKHCSIGNLWQQAVSQLVEVEEEEMGLRDLAERVRKTIRKVDGNYVSKLQGLEFFKVIESLNEARIMDITKGCSSVIALVVG 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01087 367 Gene3D - 211 362 IPR023213 -
Pumo7g01087 367 PANTHER F21J9.9 6 349 - -
Pumo7g01087 367 Gene3D - 1 204 IPR023213 -
Pumo7g01087 367 Pfam Transferase family 4 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01087 Pumo-Chr7 20710517 20713487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01087 3 176 Monolignol Biosynthesis Gene Families AT5G48930 26.257 1.37e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01087 - K13065 gmx:100792323 596.66