Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01036 ATGACTTCTACCAAACAAGCATTGAATGAAGGAGCTAGCCTCAACAAAGGATGGCCAAGATCACCTTGGCAAGATGGTCATGCTTGTGTTACTGGTAAGGCTGCTTGGGATGTGTTAACCAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCTTTTCTAGTCCCTTCTAGCACCTTGGCAAATCTTATGCCTAGGACAAGCTCAAGCACTCCTATAGAGAGGATTTGTAAAGTTCAGTGGACGACCTGTACATGTCAAGGGCAAAGGGACACTGAGATTGCTATAGTGTGCTACCAGTCTCGAGATGGAGATGATAACCACCAAATGAACCTAGATGATATTCAAGCATATAGAATATCTCTGCTTCTAATTCCTCATCCACAAATTAGGAACAAGAGGCTTTGCTTTAGAGCAAATGGGGAGGTCAAAATATGTCAATATATTGTAAATGGAATGGTATTGTGTGTAATGAAGCTCAAAGTTTTACAGAGATTTCAGCTAAGAAATATTAATATTCCTCCAACAGAAGCTCATATTCAAAATCTCAATGTGTCTGCATTCCCTAATTTAATTCGTCTAGAGCTTAGTGGATTGGGACTCAAAGGAAACATCCCCACTGAAATAAGCTTTCTTAAAATGCTTATCCATCTTGACCTGTCCTCTAATTGTCTTCAAGTGATTGCTAACTCAATTGAATTGGGGTCCAGCACTGTGGCTGGCACCAATTCATCTTGGCAATCACCCTCCGGTGATTATGCCTTTGGCTTTTACCACCTTCTTAGTGGCCGCTATCTTGTTGGAATTTGGTTTGACAAAATTCCAAAGAAAACACTGGTTTGGTCTGCAAACCGTGACAGTCCAGTGGAGGTTGGATCAACCATCAATCTCACCCGAAGTGGCCAATTTGTGCTGCAACCTCTCAATGGGGCTTCGTCAATTCCAATCTACAAAGGAACAGACACAGCTTCTGCGGTGATGCAGGATGATGGCAATTTCGTCTTGAGGGATTCACTTTCCAACATTATCTGGCAGAGCTTTGATTCACCCACGGATACTCTTCTGTTAGGCCAAACTTTGAAGACGGGCCAGAAGCTCTACTCCAACGCCAATGGATCAGTAGACTACTCCACAGGGCAATACTGTTTGGAGATCCAACAATCTGATGGAAACATTGTTCTCAAAGCTTACCGGTTTACAGATTCTGCTCACTGGTGGAGTGACACTGCACACAACACAGGTGTGAGGATTGTTTTTAACAACACAACAGCTTTTCTTTACGCGGTCAATGTCACCGGCCAAACTATACGTAACATGACAATTGAAGTAAGGGGTGCAATCGAAGATTACTATCATCGTGTGCTGGTCGATGACCAGGGAAACTTTCAGAAGTTGATTTACCATAAAGAGAACGGAAGTGAGTGGACATCTGTGTGGAAAGCCGTGGATAAGCCTTGCACTGTGACTGCCCTTTGTGGAGTGAATGGCTTTTGCAATACATCTGATTCTGACAACCGAACATTCAGTTGTGAATGCTTGCCTGGCTATACTCCTTTCGATCCAAGTGTGCCCTCCAAAGGGTGCTATCTAAGTCAGGTCAAGGACTTGTGTGCTGCAAATTCCTCTGGCCCAGACTTCAAGGTGGAAGTGGAAGTGAAAGCAATTCAAGATACAAATATACCAAACGCTGGTTATTTTTTTCTTGATCTACAAGAAATAGATAACATAGATCTAGAAAGCTGCAAGAGGGAGCTGGTAGATGATTGTCTCTGCATGGCTGCTGTTTTTGATGGCACTAATTGCTACAAGAAAAAATGGCCGATTATAAATGCCATAAGAATCATCCCTGACACTAGTAATAATGTGACGCTGATTAAAGTTCCTGTGGTTGACAATAGCATGGAAAATGAAAAGGATTCATTGTCTTTGGTTGTTTTGATAGTGGCTCTAATCTCTTGCTCCCTACTTGCTGCATTGTTTGCAGCTACTGCCATTTATCATAACCCTCAGTATGCATATCACAAAAGGAATGGCACCGGGTGGAGGAGGGTTTGGAGAGCTGTGGAAGATCCCTGTAGAGTGAATGCTGTTTGTGGTGTTTATGGCTTGTGCACTTCTCCTGACAATGAATCAGTAAAGTGTGAGTGTATTCCAGGTTATATCCCATTGGATCATCAAGATGTGTCCAAAGGGTGTCACCCACCGGCTGTCATCAATTACTGTGCAGAGATTAATTTCAAGCTGAAGGTCTTTGACGACACTGATTTCCAATTTAACACTGATTTTGTTCGCTTAGCTAATGTTAGCTTCCAAGGTGTTATAGCTAACACTATGGCAGCTTCTAATTCCTCCTCCACAAATGAGGAACAAGAGGCTCTGCTTCAGAGCAGATGGGGAGCGGGCAGAAATATCTCAGAATATTGTAAATGGAATGGTATTCTGTGCAATGAAGCTCAAAGTGTTACAGAAATTTCAACTAGGAAATATTTTTATGTTCTTCCAACAGAAGCTCATATCCAAAATCTCAATCTGTCTGCATTCCCTAATTTAATTCGTCTAGAGCTTAGTGGATTGGGACTCAGAGGAGAAATCCCCACTGAAATAAGCTTTCTTAAAAAGCTTATCCATCTTGATCTGTCCTCTAATTGTCTTCAAGGTGAGTTGCCTAGTTCTCTTTCAAGTCTCACTCAGCTTGAGACACTTAATATTTCTAACAATTTTCTCACTGGTGTGATCCCTCCTACTTTGGGTCAATTGAAGAATTTGACCAAACTCTCCCTTGACTCAAACCAAATTGAAGGTCACATTCCTGCAGAACTAGGGAATTTAAGAGGTTTGGAGCAGTTAACTCTTTCAAATAACTCACTCAATGGTTCAATCCCTTCTACTTTAAAGTACTTGATGCATCTCAATGTTTTAGATCTTTCTCATAATAAATTTTTTGGTGTTATACCAGAAGGGATATCTGCACTGACACAACTAACAAATGTTCAACTATCTTGGAATCAAATATCTGGTTCCATTCCATCTGGGATTGGACAAATCCCAACACTTGGAACTTTAGATATTTCCAACAATCAGCTTAAAGGATCTATCCCAGATGGTGTTCTGAACCATTGTAGTTATGTGCAGCTAAGCAACAACTCTTTGAGTGGAACCATTCCTTCTCAAATAGGGAATATTTCTTATCTAGATCTTAGTTATAATGACCTCACAGGCAGCATACCTGAGGAACTCCATTCTGTGTCTCACCTTAATTTGTCTTACAATTCCTTTAATGATTCAGATTACAGTTTTTGTAGTTTTCCAAAAGACTCATTAATTGGTAATAGGAAATTCAAACATAAATGCTCTTCTGATGGTCTTGTTGCTTTAGTATTGTTAATTCTCTGTTCTGCCTTCTCTGGCTTGGTCTTTACATCAGTCTTTGTAACTCCCATAATTCGTGCTTTATGTCCCTCACTTGATGAATTTGGAAATGAGGAAAGACGAAAGAATGGAGACATATTTTCAATTTGGAACTATGATGGTAAAATTGCATTTGAAGACATAATTAAAGCCACAGAGGATTTTGACATCAGGTATTGCATAGGAACAGGTGCTTATGGAAGTGTGTACAAAGCACAACTTCCCAGTGGCAGAATTGTTGCACTGAAAAAGCTTCACAAAGCAGAATCTGAAAATCCAGCCTTTTACAAGAGCTTTTGCAATGAGACAAAGATCTTGACAGAAATTCGCCACCGTAACATCATTAGGCTTTATGGCTTTTGTTTGCATAACAAGTGTATGTTTTTGGTGTATGAGTATATGGAAAGGGGAAGCTTATTTTATAACTTGTCTATTGATGTGGAATCTCAAGAGTTGAATTGGAGCAAGAGGATAAATATTGTAAAAGGGATAGCCTATGGCTTGGCTCACATGCACCATGATTGTACTCCACCCATTGTTCATCGAGACATAAGCAGTAACAATATTTTGTTGAACTCAGAGTTACAAGCTTTTGTCTCAGACTTTGGCACAGCAAGACTTCTTGATTGTCATTCATCAAATCAAACTCTTCCTGCTGGTACTTATGGATATGTTGCTCCAGAATTGGCTTACACCTTGACTGTGACTACAAAATGTGATGTATATAGCTTTGGAGTGGTGGTTTTGGAAACAATGATGGGAAGACATCCAGCTGAATTGATTTCTTCTTTATCAGAAACATCCATTCAAAACAAGAAGCTGAAAGATATATTGGACTCACGAATTCAACTACCCTTTTTTCGAAAAGATATGCAAGATATTGTGCTTATTGTAACATTAGCATTGGCATGCTTGTGCCCCCATCCAAAATCCAGACCATCAATGCAGGAAATAGCTAATGAGCTTTTAGTTTCCAAGCCACCACTGCTTTGGCATTTTGATGGCATTTCCATCCACCAACTGATGAAGCAAAAAATATATATAATTGGTAGAAGCTAG 4470 0.4013 MTSTKQALNEGASLNKGWPRSPWQDGHACVTGKAAWDVLTNFEQRWTKQCDPSFLVPSSTLANLMPRTSSSTPIERICKVQWTTCTCQGQRDTEIAIVCYQSRDGDDNHQMNLDDIQAYRISLLLIPHPQIRNKRLCFRANGEVKICQYIVNGMVLCVMKLKVLQRFQLRNINIPPTEAHIQNLNVSAFPNLIRLELSGLGLKGNIPTEISFLKMLIHLDLSSNCLQVIANSIELGSSTVAGTNSSWQSPSGDYAFGFYHLLSGRYLVGIWFDKIPKKTLVWSANRDSPVEVGSTINLTRSGQFVLQPLNGASSIPIYKGTDTASAVMQDDGNFVLRDSLSNIIWQSFDSPTDTLLLGQTLKTGQKLYSNANGSVDYSTGQYCLEIQQSDGNIVLKAYRFTDSAHWWSDTAHNTGVRIVFNNTTAFLYAVNVTGQTIRNMTIEVRGAIEDYYHRVLVDDQGNFQKLIYHKENGSEWTSVWKAVDKPCTVTALCGVNGFCNTSDSDNRTFSCECLPGYTPFDPSVPSKGCYLSQVKDLCAANSSGPDFKVEVEVKAIQDTNIPNAGYFFLDLQEIDNIDLESCKRELVDDCLCMAAVFDGTNCYKKKWPIINAIRIIPDTSNNVTLIKVPVVDNSMENEKDSLSLVVLIVALISCSLLAALFAATAIYHNPQYAYHKRNGTGWRRVWRAVEDPCRVNAVCGVYGLCTSPDNESVKCECIPGYIPLDHQDVSKGCHPPAVINYCAEINFKLKVFDDTDFQFNTDFVRLANVSFQGVIANTMAASNSSSTNEEQEALLQSRWGAGRNISEYCKWNGILCNEAQSVTEISTRKYFYVLPTEAHIQNLNLSAFPNLIRLELSGLGLRGEIPTEISFLKKLIHLDLSSNCLQGELPSSLSSLTQLETLNISNNFLTGVIPPTLGQLKNLTKLSLDSNQIEGHIPAELGNLRGLEQLTLSNNSLNGSIPSTLKYLMHLNVLDLSHNKFFGVIPEGISALTQLTNVQLSWNQISGSIPSGIGQIPTLGTLDISNNQLKGSIPDGVLNHCSYVQLSNNSLSGTIPSQIGNISYLDLSYNDLTGSIPEELHSVSHLNLSYNSFNDSDYSFCSFPKDSLIGNRKFKHKCSSDGLVALVLLILCSAFSGLVFTSVFVTPIIRALCPSLDEFGNEERRKNGDIFSIWNYDGKIAFEDIIKATEDFDIRYCIGTGAYGSVYKAQLPSGRIVALKKLHKAESENPAFYKSFCNETKILTEIRHRNIIRLYGFCLHNKCMFLVYEYMERGSLFYNLSIDVESQELNWSKRINIVKGIAYGLAHMHHDCTPPIVHRDISSNNILLNSELQAFVSDFGTARLLDCHSSNQTLPAGTYGYVAPELAYTLTVTTKCDVYSFGVVVLETMMGRHPAELISSLSETSIQNKKLKDILDSRIQLPFFRKDMQDIVLIVTLALACLCPHPKSRPSMQEIANELLVSKPPLLWHFDGISIHQLMKQKIYIIGRS 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01036 1489 FunFam Leucine-rich repeat receptor protein kinase MSP1 1157 1270 - -
Pumo7g01036 1489 MobiDBLite consensus disorder prediction 1 20 - -
Pumo7g01036 1489 FunFam Nuclear pore complex protein NUP107 775 938 - -
Pumo7g01036 1489 SUPERFAMILY L domain-like 158 229 - -
Pumo7g01036 1489 Gene3D Ribonuclease Inhibitor 938 1118 IPR032675 -
Pumo7g01036 1489 ProSiteProfiles Protein kinase domain profile. 1192 1467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01036 1489 Gene3D Phosphorylase Kinase; domain 1 1159 1270 - -
Pumo7g01036 1489 SMART LRR_typ_2 920 944 IPR003591 -
Pumo7g01036 1489 SMART LRR_typ_2 1016 1040 IPR003591 -
Pumo7g01036 1489 SMART LRR_typ_2 896 919 IPR003591 -
Pumo7g01036 1489 SMART LRR_typ_2 213 236 IPR003591 -
Pumo7g01036 1489 SMART LRR_typ_2 968 992 IPR003591 -
Pumo7g01036 1489 SMART LRR_typ_2 872 895 IPR003591 -
Pumo7g01036 1489 Pfam S-locus glycoprotein domain 435 519 IPR000858 GO:0048544
Pumo7g01036 1489 Pfam S-locus glycoprotein domain 676 723 IPR000858 GO:0048544
Pumo7g01036 1489 Gene3D - 240 349 IPR036426 -
Pumo7g01036 1489 FunFam MDIS1-interacting receptor like kinase 2 1271 1465 - -
Pumo7g01036 1489 SUPERFAMILY L domain-like 837 1093 - -
Pumo7g01036 1489 Gene3D Ribonuclease Inhibitor 778 937 IPR032675 -
Pumo7g01036 1489 Gene3D - 352 492 - -
Pumo7g01036 1489 CDD B_lectin 242 351 IPR001480 -
Pumo7g01036 1489 PANTHER LEUCINE RICH REPEAT KINASE 2 1038 1463 - -
Pumo7g01036 1489 Pfam Protein kinase domain 1197 1457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01036 1489 SUPERFAMILY alpha-D-mannose-specific plant lectins 266 410 IPR036426 -
Pumo7g01036 1489 Gene3D Ribonuclease Inhibitor 57 239 IPR032675 -
Pumo7g01036 1489 SUPERFAMILY Protein kinase-like (PK-like) 1173 1460 IPR011009 -
Pumo7g01036 1489 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 227 349 - -
Pumo7g01036 1489 FunFam Leucine-rich receptor-like protein kinase family protein 939 1035 - -
Pumo7g01036 1489 Gene3D Transferase(Phosphotransferase) domain 1 1271 1464 - -
Pumo7g01036 1489 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1316 1328 IPR008266 GO:0004672|GO:0006468
Pumo7g01036 1489 Pfam Leucine Rich Repeat 216 234 IPR001611 GO:0005515
Pumo7g01036 1489 Pfam Leucine Rich Repeat 874 896 IPR001611 GO:0005515
Pumo7g01036 1489 ProSiteProfiles Bulb-type lectin domain profile. 232 349 IPR001480 -
Pumo7g01036 1489 Pfam D-mannose binding lectin 279 365 IPR001480 -
Pumo7g01036 1489 ProSiteProfiles EGF-like domain profile. 483 523 IPR000742 -
Pumo7g01036 1489 ProSiteProfiles Leucine-rich repeat profile. 215 236 IPR001611 GO:0005515
Pumo7g01036 1489 ProSitePatterns Protein kinases ATP-binding region signature. 1198 1220 IPR017441 GO:0005524
Pumo7g01036 1489 SMART egf_5 486 530 IPR000742 -
Pumo7g01036 1489 SMART egf_5 692 734 IPR000742 -
Pumo7g01036 1489 Pfam Leucine rich repeat 898 957 IPR001611 GO:0005515
Pumo7g01036 1489 SMART blect_4 238 351 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01036 Pumo-Chr7 19578348 19594983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01036 851 1364 Receptor kinase-like Gene Family AT4G08850 38.961 3.78e-105 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo7g01036 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01036 - - vun:114165534 1142.49