Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01019 ATGCGGGTGTTGTTTGAGATAGGACTGGTAGTGGAAACTTCAATATTTGCATGGAAGCCAGAGACGATGCACTTAGTTCTGGGTTACAGTGATAGGGGCGAAGCGTCCATAAAGCTTCCATGTGGCCCGAGAGTGGAAGCTCCAAACCAGGTCATCATGTCCTGTATGGTGCGCTGCTACAGCTGCACACCTGTTGGTGTCCACCTTTGCCCAAAATTCATGACAAAGTTCTTAGTTTTTGAAATGGCGTTAAGCCATCCTTTTGATAAATTTTTGCACAGCAAGGACATTACGATGAAGGTGATATCCTTTTCTCAACAAGGGCCACGAGCTATATGTATCTTATCTGCTAATGGTGTAATTTCAAATGTTACACTTCGTCAGCCTGATTCTTCTGGGGGTACTTTAACTTATGAGGGCCGTTTTGAGATACTTTCCTTGTCCGGATCATTCATGCCTACTGACAACCAAGGAACAAGAAGCAGGTCCGGTGGAATGTCTGTCTCGTTGGCTAGCCCTGATGGCCGTGTTGTAGGTGGTGGAGTTGCTGGTCTTCTTGTAGCTGCCAGCCCTGTGCAGGGAGAGAATTTAAAGGGAAAAAGAGGCAAGCGTAAGTCCCACATCAGTTGTGTGAAAAACATGTCTAGTGTTTATAAAGCGATGAAAAGAGAAGGTTTTGCACTGGGCATGGTAACTCTTGCCTGTAACCCAAGTGGGAGTAATAAAGTGTGTGGAAGGTATCAGCATGGCCATTGGCCATGGGTGTTGTGGCTCTGGAGGGACCCTCTGGTCAGCATGAAGGGTGTGCCCTGA 813 0.4699 MRVLFEIGLVVETSIFAWKPETMHLVLGYSDRGEASIKLPCGPRVEAPNQVIMSCMVRCYSCTPVGVHLCPKFMTKFLVFEMALSHPFDKFLHSKDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQGENLKGKRGKRKSHISCVKNMSSVYKAMKREGFALGMVTLACNPSGSNKVCGRYQHGHWPWVLWLWRDPLVSMKGVP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01019 270 Gene3D - 90 207 - -
Pumo7g01019 270 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 193 IPR005175 -
Pumo7g01019 270 ProSiteProfiles PPC domain profile profile. 80 221 IPR005175 -
Pumo7g01019 270 SUPERFAMILY AF0104/ALDC/Ptd012-like 93 193 - -
Pumo7g01019 270 CDD DUF296 90 176 IPR005175 -
Pumo7g01019 270 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 95 193 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01019 Pumo-Chr7 18930533 18939460 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01019 95 207 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 75.207 2.53e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01019 - - ccaj:109801852 175.252