Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01015 ATGGATTGTGGGGGTAATAAGATTGATGGAAGTGAAAGAGGTGGGCCTTGTGGTGCCTGCAAGTTTCTGAGGAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACTCAGACCAAGGAACGGCTCATTTTGCTGCGGTGCACAAGGTGTTTGGTGCTAGCAATGCCTCTAAGTTACTCATGCGGATTCCAGCACACAAGAGACTTGATGCTGTTGTTACTCTTTGCTATGAGGCTCTGGCTAGGGCTAGAGACCCCGTTTATGGTTGTGTTGGTCACCTCTTTGCTCTTCAACAACAGGTGATGAACTTGCAGGCTGAGCTAACCTATGTCCAGGCCCGACTCGCCACAATGCAGCGATTGCCGATGCAAGTGGCTCCTCTTCCACACCCTCAAAGCTCTTCACCACCAACCCTTCATTCCTCAGATCACTTGGCATCAAATGCTGACTTGCAAAGTGCCCCTATGCACTTTGATCCTCTTCAGCCACATTCAACATCATTAGAGTTGAGCAGCATCGTTTTCAATCAATCAGATCAACAAATCGAGGATAGGGAGCTCCAAGCTTTGGCTCGAGAATTTGTGACCAAATACTTGCCAGGAGTAAGATTCCAGCAATCTAACTCTCCCTGA 639 0.4789 MDCGGNKIDGSERGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALARARDPVYGCVGHLFALQQQVMNLQAELTYVQARLATMQRLPMQVAPLPHPQSSSPPTLHSSDHLASNADLQSAPMHFDPLQPHSTSLELSSIVFNQSDQQIEDRELQALAREFVTKYLPGVRFQQSNSP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01015 212 ProSiteProfiles LOB domain profile. 15 117 IPR004883 -
Pumo7g01015 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 146 - -
Pumo7g01015 212 Pfam Lateral organ boundaries (LOB) domain 16 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01015 Pumo-Chr7 18777866 18783490 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01015 14 210 AS2 family AT4G00210 55.450 6.52e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pumo7g01015 LOB 2.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01015 - - gmx:100791377 410.609