Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01014 ATGAGTATAAACTCTAGTTGTAGTATAAGTGGTGGAAACACCAGTGGTGGTGGTAACAACAGCGGTGGTGGTAGTCCTTGTGGCGCGTGCAAGTTTTTGAGGCGAAAGTGCGTGCCCGGTTGCATCTTTGCTCCGTACTTTGATTCGGAGCAAGGTGCCACGCACTTTGCCGCGGTGCACAAGGTTTTTGGTGCTAGCAACGTTTCCAAGTTACTCCTCAACATTCCGGTGCATAAGAGGCTTGATGCGGTGGTGACAATTTGCTATGAAGCTCAGGCAAGGCTTAGAGACCCCGTGTATGGTTGTGTTGCTCATATCTTCGCTCTTCAGCAACAGGTGGTGAGTTTACAAGCAGAACTCTCCTACTTACAAGGCCACCTTGCAACCCTAGAGTTACCCCAACCTCCACAACCACAAGCAACCACCATGGCACCCCCAGTGATCTCAATAGCTGAGCTCCAATTATCAGCCTCAGCCTCTTCTACCGTGCCAGCCACATATGACCTCTCTTCACTTTTTGATCCAATGGCCCAGACTCCTTCATGGGCCGTGCAGCCCAGGCCCATAGAGTCACGTCAATATGTGGGTAGTGGGCCTAGTGGCGGCCCATCAGCCACTAGTACTGCTAGTGGTGGTGATCTTCAAGCATTGGCTCGTGAGCTTTTGCATAGACATGGATCTGCCCCAGTTGTTGCATGCTCTAATCCCTCCTCCTCTTCTCACTCGCTTTCCAAATGA 738 0.5122 MSINSSCSISGGNTSGGGNNSGGGSPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELSYLQGHLATLELPQPPQPQATTMAPPVISIAELQLSASASSTVPATYDLSSLFDPMAQTPSWAVQPRPIESRQYVGSGPSGGPSATSTASGGDLQALARELLHRHGSAPVVACSNPSSSSHSLSK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01014 245 ProSiteProfiles LOB domain profile. 25 127 IPR004883 -
Pumo7g01014 245 MobiDBLite consensus disorder prediction 197 213 - -
Pumo7g01014 245 Pfam Lateral organ boundaries (LOB) domain 26 124 IPR004883 -
Pumo7g01014 245 PANTHER LOB DOMAIN CONTAINING PROTEIN 22 147 - -
Pumo7g01014 245 MobiDBLite consensus disorder prediction 184 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01014 Pumo-Chr7 18752951 18757231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01014 29 245 AS2 family AT2G45420 59.111 7.57e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pumo7g01014 LOB 2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01014 K21994 - gmx:100779541 335.88