Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01011 ATGGATCCTGTAGCAGCACAAGGACGTCCTCTCCCTCCACCTTTTCTCACTAGAGATCTTCACTTACACCCTCACCACCAATTCCAGCCCCACCACAACCACCAAAACACCGAGGAAGAAGCCGGCAATGGCCGCGGCCAGAAGCGAGACCGCGACGACAACACCGGAGGCGGGGCCACCACGCCCCCCCACGCCGGCGGAGAGGGCAAGGAGTCCGGGTCAGGAGAAGGAGGAGGAAGTGACATGGGAAGAAGACCCAGAGGAAGACCCGCAGGGTCCAAGAACAAGCCCAAACCACCCATTATCATCACAAGGGACAGTGCCAACGCCCTCCGATCCCATGTCATGGAAATCGCCAACGGCTGTGACATCATGGAGAGCGTCACCGCCTTTGCGAGGCGGCGGCAGCGCGGCGTCTGCGTGCTCAGCGGCAGCGGCACCGTCACCAACGTCACGCTCCGGCAGCCAGCCTCGCCGGGTGCCGTCGTGACCCTTCATGGAAGGTTCGAGATTCTGTCCCTGTCCGGCTCGTTCCTACCGCCGCCGGCCCCGCCAGCGGCGTCAGGGCTAGCCATATACTTGGCTGGCGGACAGGGACAGGTAGTAGGTGGGAGCGTGGTGGGACCCCTTGTGGCCTCAGGCCCTGTTGTCATCATGGCTGCCTCATTTGGTAATGCTGCTTATGAGAGACTACCCTTAGAGGAAGAGGAAACTCCGGTGCCAGTTCCTGGCACCGGAGGATTAGGGTCTCCGGGAATCCCAGGGACCCAACAGCAACCACAATCGCAGCCGCAACATCAACAACAGCTTGTGGGAGATCCTAATAGTTCTTCTCTTTTCCATGGAGTGCCTCAGAATCTTCTCAATTCAGTTCAATTACCGGCTGAGGGTTATTGGAGTGGCAGTGCTCGCCCCCCCTTTTAA 924 0.5974 MDPVAAQGRPLPPPFLTRDLHLHPHHQFQPHHNHQNTEEEAGNGRGQKRDRDDNTGGGATTPPHAGGEGKESGSGEGGGSDMGRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIANGCDIMESVTAFARRRQRGVCVLSGSGTVTNVTLRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLAIYLAGGQGQVVGGSVVGPLVASGPVVIMAASFGNAAYERLPLEEEETPVPVPGTGGLGSPGIPGTQQQPQSQPQHQQQLVGDPNSSSLFHGVPQNLLNSVQLPAEGYWSGSARPPF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01011 307 MobiDBLite consensus disorder prediction 19 55 - -
Pumo7g01011 307 MobiDBLite consensus disorder prediction 236 283 - -
Pumo7g01011 307 SUPERFAMILY AF0104/ALDC/Ptd012-like 108 243 - -
Pumo7g01011 307 MobiDBLite consensus disorder prediction 1 102 - -
Pumo7g01011 307 FunFam AT-hook motif nuclear-localized protein 111 238 - -
Pumo7g01011 307 Gene3D - 111 240 - -
Pumo7g01011 307 CDD DUF296 112 179 IPR005175 -
Pumo7g01011 307 ProSiteProfiles PPC domain profile profile. 108 244 IPR005175 -
Pumo7g01011 307 MobiDBLite consensus disorder prediction 251 283 - -
Pumo7g01011 307 PIRSF ESCAROLA 16 307 IPR014476 GO:0003680
Pumo7g01011 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 287 IPR014476 GO:0003680
Pumo7g01011 307 Pfam Plants and Prokaryotes Conserved (PCC) domain 112 224 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01011 Pumo-Chr7 18703698 18705482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01011 1 307 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 63.720 1.06e-88 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01011 - - gmx:100816243 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g01011 7 18703698 18705482 Pumo7g01011 7 18703698 18705482 ECH