Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01002 ATGGAAGCTAAACCTCTTCGAATTGTTCCCTCTTCACACAACACTTCTGGCGGTGGACCCCAGAGGAAGATTGACATGGGACACGAGATGGAAGGTGGTGTTGTTGTTGATGAGAGAAAGAGGGTTGTTATGGTCAAGGAAGAGAAACAGTACACTTCTTCAAACAGTGTTGAACTTCATCTCGGGGTTGATGCTTCTCATTCTGCTCCACAAGAAATAAACCATGTGATCACTGAAGCTCAGAGGCGTGAGCTTCACCATCAAGTTTTCATCTTCAACCATTTGGCGTATAAACTTCCTCCTCCTTATCACCTTGTGCAATTCCCAAGCAACATGGCAGAATACAGTTTCCTGGGTTTTGATCATGGGAGTATGGTGGATCCAGAACCTCATAGGTGTAGAAGAACTGATGGGAAGAAATGGAGGTGTGGTAAGAATGTGGTGCCTAACCAGAAGTACTGTGAAAGGCACATGCATAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAACATCTCAAGTTAACTCTCCTTTGGCAACAAAGCCTTCTTCTAGCAAGTCACATACCAAACCAGCCTCAAAGACAGAATTTGAAATTTCAAATCCAAACCTTATTATGGCCATTCCACCTAGTGACACATCAAGTACCCCATCAAGGAGCCTCAGTGTTGTCAATTGCTCTTCTGCTAATAATAGGTCGAAAAATAGTGTAAGTTATGCTGACTACCTCGCGTCGTTTTCTTCTGCGTCTGCAGTGTCCTCTGGCTCCACTCTTGCCACTGCAGTTGCCCCTAAGATGGCCACCTTCAGCAGCACGACATCCGTTGCTTCAGATAGCAAAAGATGCCTAAATATATGCCAGAAAGATAACCAGTCCAAGAGCTGTATCAGCAACAACATCAGTGTTAAAAGTGGTGGGAAAGGAAGCATTGTTTGTGATACTAATGGCATCTCTACTGGAATAGGCTTCTCCCCAACGAGTGTTCTTCAAGCTGCAGTTTCAGTTTCTGGTTGCAACCCTTCATACCTGAATGACAGAACCAACATAGAACCTGCATCCGGTAGGTGCCGGAGAACAGACGGTAAGAAGTGGCAGTGCAAGAGTGCTGTTCTTCCTGGTCAGAAGTACTGTGCCACACACATGCACAGAGGTGCTAAAAAGCGTTTCGCAAGCCATGAACCAGCAGCCACTGCTACTAGTTCTGCGGTTACCATTGCGCGGTTGCCTTACCCTTCAGCCACAACCAACATACAGAAAGCACATTGTGCAATTCCAAACACAAATCTATCCATGTCAGTCCCAGCAAGTGAACCATTCATACAATGTAATGAGAAAAGTCAAAGTAGCAGTGACACTGATACCACCATCAGTGACACCTTGAATGAGTGTAGCTATGCTTCTTTCTGA 1407 0.4527 MEAKPLRIVPSSHNTSGGGPQRKIDMGHEMEGGVVVDERKRVVMVKEEKQYTSSNSVELHLGVDASHSAPQEINHVITEAQRRELHHQVFIFNHLAYKLPPPYHLVQFPSNMAEYSFLGFDHGSMVDPEPHRCRRTDGKKWRCGKNVVPNQKYCERHMHRGRNRSRKPVETSQVNSPLATKPSSSKSHTKPASKTEFEISNPNLIMAIPPSDTSSTPSRSLSVVNCSSANNRSKNSVSYADYLASFSSASAVSSGSTLATAVAPKMATFSSTTSVASDSKRCLNICQKDNQSKSCISNNISVKSGGKGSIVCDTNGISTGIGFSPTSVLQAAVSVSGCNPSYLNDRTNIEPASGRCRRTDGKKWQCKSAVLPGQKYCATHMHRGAKKRFASHEPAATATSSAVTIARLPYPSATTNIQKAHCAIPNTNLSMSVPASEPFIQCNEKSQSSSDTDTTISDTLNECSYASF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01002 468 MobiDBLite consensus disorder prediction 154 200 - -
Pumo7g01002 468 ProSiteProfiles WRC domain profile. 350 395 IPR014977 -
Pumo7g01002 468 MobiDBLite consensus disorder prediction 1 26 - -
Pumo7g01002 468 Pfam WRC 352 390 IPR014977 -
Pumo7g01002 468 Pfam WRC 128 170 IPR014977 -
Pumo7g01002 468 MobiDBLite consensus disorder prediction 168 200 - -
Pumo7g01002 468 PANTHER GROWTH-REGULATING FACTOR 5 342 446 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pumo7g01002 468 ProSiteProfiles QLQ domain profile. 76 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pumo7g01002 468 ProSiteProfiles WRC domain profile. 127 171 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01002 Pumo-Chr7 18503505 18507244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01002 80 429 GRF Transcription Factor Family AT2G45480 31.496 5.06e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01002 - - gmx:100795050 778.474