Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01000 ATGGACGAAAACCCGAAACGACAATGGTCCCTCAGCGACTTCGAGATCGGAAAGCCTCTCGGCAAAGGCAAATTCGGCAGAGTCTACGTCGCCAGAGAAGTCAAGAGCAAATTCGTGGTTGCATTGAAGGTTATTTTCAAGGAACAACTTGAGAAGTACCGAATCCATCACCAACTGAGGAGGGAGATGGAGATTCAGTTCAGTCTGAAGCACGCGAACGTGCTTCGTCTCTATGGTTGGTTTCATGACTCTGAGCGCGTCTATTTGATTCTCGAATATGCTCACAATGGGGAGCTTTACAAGGAGCTTAGCAAAAAGGGGCATTTTAGTGAGAAGCAGGCTGCAACGTATATTTTAAGCCTCACAAAGGCATTGGCATATTGTCATGAGAAGGATGTTATTCACAGGGATATCAAGCCTGAAAATTTGTTGCTTGACCATGAGGGTCGTCTTAAGATTGCAGACTTTGGTTGGTCAGTACAGTCTAGAAGCAAAAGGCATACCATGTGTGGAACCTTGGATTATTTAGCACCCGAAATGGTAGAAAACAAAGCTCATGATTATGCAGTTGATAACTGGACTCTGGGTATCCTTTGCTATGAGTTCCTTTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAAGTTGATACCTTCAAAAGGATAATGAAGGTTGACCTAAGTTTCCCTTCTACTCCTTATGTTTCTTTAGAAGCCAAAAATCTTATTAGTCGGCTGCTGGTAAAAGACTCTTCACGAAGACTCTCACTTAAGAGGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCCTATGGGTCTCGGCAACTAG 831 0.4368 MDENPKRQWSLSDFEIGKPLGKGKFGRVYVAREVKSKFVVALKVIFKEQLEKYRIHHQLRREMEIQFSLKHANVLRLYGWFHDSERVYLILEYAHNGELYKELSKKGHFSEKQAATYILSLTKALAYCHEKDVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGAPPFEAESQVDTFKRIMKVDLSFPSTPYVSLEAKNLISRLLVKDSSRRLSLKRIMEHPWIIKNANPMGLGN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01000 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Pumo7g01000 276 CDD STKc_Aurora 13 265 - -
Pumo7g01000 276 Gene3D Transferase(Phosphotransferase) domain 1 98 273 - -
Pumo7g01000 276 FunFam Serine/threonine-protein kinase ark1 6 273 - -
Pumo7g01000 276 PIRSF ILK 3 268 - -
Pumo7g01000 276 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Pumo7g01000 276 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 4 272 IPR030616 GO:0004672
Pumo7g01000 276 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524
Pumo7g01000 276 Pfam Protein kinase domain 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01000 276 FunFam Aurora kinase A 6 97 - -
Pumo7g01000 276 SMART serkin_6 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g01000 276 SUPERFAMILY Protein kinase-like (PK-like) 8 269 IPR011009 -
Pumo7g01000 276 ProSiteProfiles Protein kinase domain profile. 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01000 Pumo-Chr7 18482012 18485141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01000 6 271 CBL-interacting serine-threonine protein kinases AT5G10930 38.828 8.58e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Pumo7g01000 Pkinase 1.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01000 K08850 - gmx:100775802 536.954