Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00963 ATGGCTGATGAAGCTTCTGGAGACGTTGATCTAAGGTTGGGAGAGCCCAAGGGGCCTAAAGAGGAGCCCGAGACGGAGGAGGGTTCCGCGATACGTGTGATGCCGGTGGCGGTGCACGTGCCGGCGGGGATGTCGATGTCCATGTCCAAGGCTCTAGCCCAAGCCCAGGCCCAACCTCAAAAGCGGGCCTCCACCAAGGACCGTCACACCAAAGTCGAGGGCCGAGGCAGGAGGATCCGAATGCCCGCCACGTGTGCGGCGCGGATCTTCCAACTGACCCGGGAGCTCGGTCACAAGTCCGACGGCGAGACCATCCGGTGGCTCCTCGAGCACGCCGAGCCCGCCATCATCGCCGCCACCGGCACCGGCACCGTCCCCGCCATCGCGATGTCCGTCAACGGAACCTTAAAGATTCCCACAACCTCCCCCTCCGACCCGGAACCCGGAGACCCGCCCGAGAGGAAGAAGCGCAAACGACCCGCGAATAGCGCCTACTTGGATATAAACGACGCCGCCGTTTCGGTCTCGGCCGGACTCGCAAGCTCTAATAATAATAATAATAACCAAAACGCAGCAACGACGACAACCACAACAACGACGATGGCAATTCCGCAACATACAGCTATTCCGCTGCCTCAAGGTATGGTTCCCGTGTGGGCCATACCTTCAAACGCCGTCGTTCCGGCTGCAGGCGCGTTTTTTGTGGTTCCTCAAACGGCGTCGTTTCAGCACCAACCTCAGTTCTTCACCATAGCGAGGCCTATCTCTGCGTTCGTCTCTTCCATGGTCACACCCGTTCAACTTCAACCAGCCTCGATAACCTCTTCCGCCAACGCTAACGCTTCCTCCACCGCGCCGTCGTTGAAATCGCCGGCGAGAGCCACCGTCATGGCTCCGACCACCACCACCACCACCGCCGCCACCAACTCCACGACGACGACGCAGATGCTGAGAGATTTCTCGCTGGAGATTTACGACAAGCAAGAGCTACAGTTCATGTCGCGCGCGTCTTCCAAGCATTGA 1023 0.5973 MADEASGDVDLRLGEPKGPKEEPETEEGSAIRVMPVAVHVPAGMSMSMSKALAQAQAQPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPSDPEPGDPPERKKRKRPANSAYLDINDAAVSVSAGLASSNNNNNNQNAATTTTTTTTMAIPQHTAIPLPQGMVPVWAIPSNAVVPAAGAFFVVPQTASFQHQPQFFTIARPISAFVSSMVTPVQLQPASITSSANANASSTAPSLKSPARATVMAPTTTTTTAATNSTTTTQMLRDFSLEIYDKQELQFMSRASSKH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00963 340 MobiDBLite consensus disorder prediction 274 311 - -
Pumo7g00963 340 ProSiteProfiles TCP domain profile. 65 119 IPR017887 -
Pumo7g00963 340 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 43 327 IPR005333 GO:0003700
Pumo7g00963 340 MobiDBLite consensus disorder prediction 148 163 - -
Pumo7g00963 340 MobiDBLite consensus disorder prediction 1 29 - -
Pumo7g00963 340 MobiDBLite consensus disorder prediction 136 163 - -
Pumo7g00963 340 Pfam TCP family transcription factor 64 188 IPR017887 -
Pumo7g00963 340 MobiDBLite consensus disorder prediction 51 75 - -
Pumo7g00963 340 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00963 Pumo-Chr7 17602898 17604582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00963 45 339 TCP Transcription Factor Family AT2G45680 54.938 1.08e-93 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pumo7g00963 TCP 1.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00963 - - gmx:100804760 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00963 7 17602898 17604582 Pumo7g00963 7 17602898 17604582 ECH