Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00956 ATGAGCACGCAGGTGCAGCAGCTGAAAAGGTTCAACTCAATGGAACGCAGGCCTAGAATGCTGAAGGACTTCCTCAGCGAGAATCTAAACTCGTGCTCCTCAAGCGGATTCAAATCACTTCCAAGAAAACCAAACAACAACAACAACAACAACAGCATGCACAGCCTCATAGAAATGGAACTCAAATCATCTTCTTCATCGTCAAACTCACCCTTTCAAACACTCATGAACACCATAAGAAGCATCTCTCTCTTCACCTCGATGAAATCAAAATCACCCTCCGTGCTCTCCCTACCACGGAGCCTCTCTCGCAAGCTATCATCTTCAAGAAGAACGAGAAGGAGAAGAAGAAGCCAAGTTTGCAACGATATCAACATCACAACGGTGAAGATCAAGGACATCATACGGTGGAAATCGTTCAGGGACGTTGTTGAACCTTCTCTTCCACCACCACCGTTGGATTTCATGATGGGGCCCACCAACACCACCACCACCACCACTTGTAGTAGTAGCAGAGGCTCTAGTTGGAGTGAGAGTGATTTTTTAACCTCGTCTTGGGAGGAAGCACAAAACGACGACGTTGAAGCGGGTAAAAGGTTTTCGTTTTCACCCCTTGTTGTCGGCAAGGACTCTGGGGCTACGGAAGTTTTAACTTGCCAAGAAGAACAACACAGTCCAGTTTCAGTTCTTCAGGTTGGAGAAGATGAATTCTCACCATTTGATCAAAGCCTTGCCAATATTCAAAAGAGAAAACAGAAGTTCATACAAACAGTTCAGAAATTGGAGAGTCTTGCAAAATTTGACCTTGCAAACTTAGACCGATGTCTCTCATTGGATGACAACTCTGGCTATGATGAAGAATATGAAGATGAAGAAGATGATGATATAGTCATTGAAGAACAAGATTGGATTGAGGAAAAGGCAAAGCAGCTGCTACATTGTGTTAAAGCAAGACGTTCAGCACATGGCTGTAAAGACTATTTGGATACACTTCTGTTGGATTTTTTCAGGGAAGAACTAAGTGGAAGTAGAAACCAACATAAGAATGAAGAGGAGTTTGAGTTGGAGACATTGAGAATAGCTGAGGATTGGATAAATGGGTCATTTGCCTTTGATGCAGGGCTTGTTGACAAACATGCTTACATAAAGGACATGGAAAGGAGAGATCAGTGGAGTAGGTTTGAGGAGGAGCAAGAAGAATTGGCCTTTGAAATTGAAACAGCTATATTGCATAGTTTGGTTGCTGATCTTATGGACCTGGATGGTTAA 1269 0.431 MSTQVQQLKRFNSMERRPRMLKDFLSENLNSCSSSGFKSLPRKPNNNNNNNSMHSLIEMELKSSSSSSNSPFQTLMNTIRSISLFTSMKSKSPSVLSLPRSLSRKLSSSRRTRRRRRSQVCNDINITTVKIKDIIRWKSFRDVVEPSLPPPPLDFMMGPTNTTTTTTCSSSRGSSWSESDFLTSSWEEAQNDDVEAGKRFSFSPLVVGKDSGATEVLTCQEEQHSPVSVLQVGEDEFSPFDQSLANIQKRKQKFIQTVQKLESLAKFDLANLDRCLSLDDNSGYDEEYEDEEDDDIVIEEQDWIEEKAKQLLHCVKARRSAHGCKDYLDTLLLDFFREELSGSRNQHKNEEEFELETLRIAEDWINGSFAFDAGLVDKHAYIKDMERRDQWSRFEEEQEELAFEIETAILHSLVADLMDLDG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00956 422 MobiDBLite consensus disorder prediction 157 174 - -
Pumo7g00956 422 MobiDBLite consensus disorder prediction 151 174 - -
Pumo7g00956 422 MobiDBLite consensus disorder prediction 93 118 - -
Pumo7g00956 422 Coils Coil 244 264 - -
Pumo7g00956 422 PANTHER OS04G0572500 PROTEIN 4 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00956 Pumo-Chr7 17537735 17540290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00956 14 416 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 32.500 1.73e-45 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00956 - - gmx:100802653 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00956 7 17537735 17540290 Pumo7g00956 7 17537735 17540290 ECH