Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00931 ATGTCTTGCGACGTTGTCCCTATAGGATCTAAGCAACGACAAGTCTGCATGACCTTCTCTGAATGGCGATCAAACAATTTGCTCTACCAAGTCAGCCTGAGTGCTGTGGGTAAAGAGAAGGCTACGGTATCTCTTCAGAGATTGTCAATGTCGGCTGAAACAATGCGTGCAATTGTTGGACACGGTGGCATTCGGCCATTGATTGAGCTTTGTCAAAGTGGTGATTCTGTGTCACAGGCTGCTGCTGCCTGTACTTTGGCAAATGTATCCGCTGTTCCTGAGGTGAGACAGGCTTTGGCTGAAGAAGCTGGCACATTGCCATGCAACCATTCTGTCAAGCTTGGATCCCTAATGGTATTGTAA 363 0.4766 MSCDVVPIGSKQRQVCMTFSEWRSNNLLYQVSLSAVGKEKATVSLQRLSMSAETMRAIVGHGGIRPLIELCQSGDSVSQAAAACTLANVSAVPEVRQALAEEAGTLPCNHSVKLGSLMVL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00931 120 Gene3D - 25 113 IPR011989 -
Pumo7g00931 120 SUPERFAMILY ARM repeat 38 102 IPR016024 -
Pumo7g00931 120 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 32 107 - -
Pumo7g00931 120 Pfam Armadillo/beta-catenin-like repeat 57 91 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00931 Pumo-Chr7 17000936 17003098 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00931 37 116 U-box Gene Family AT2G23140 36.250 5.51e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00931 - - gmx:100809488 125.946