Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00926 ATGCAATGTTGCTGCTTTATAGGCCAACTGCTCACAGCAACATCTCCACAGATAAGGGAGTACACGGTTACTGTTATATGCTCTCTTGTGGAATCGGGGAGCTGTGAAAAGTGGCTATGCGTGGGTAAAGAGAAGGCTACGGTATCTCTTCAGAGATTGTCAATGTCGGCTGAAACAATGCGTGCAATTGTTGGACACGGTGGCATTCGGCCATTGATTGAGCTTTGTCAAAGTGGTGATTCTGTGTCACAGGCTGCTGCTGCCTGTACTTTGGCAAATGTATCCGCTGTTCCTGAGGTGAGACAGGCTTTGGCTGAAGAAGGTATTGTGAAGGTTATGATCAATCTTCTTAATTGTGGAATTTTATTAGGTTCCAAAGAGTATGCAGCTGAGTGCTTGCAGAATCTCACTTCAAGCAATGAGCATCTGAGAAAGTCTGTGATATCAGAAGACGGTGTTAGGAGTCTTCTAGCCTATCTTGATGGTCCACTTCCCCAAGAATCTGAAGTTGGAGCATTGAGGAATCTGGTTGGTTCAGTTTCTGAGGAAACTTTCGTTTCTCTTGGTTTGCTTCCGCGTTTGGTTCACGTGCTGAAGTCCGGATCGTTGGGTGCTCAACAAGCCGCCGCGTCTATCATCTGCCGTGTTTGCAGCTCAATGGAGATGAAGAAAACAGTTGGTGAAACCGGGTGCATCCCTCTTCTTATAAAGATGCTTGAGGCTAAATCAAATGCTGCTAGAGAGGTTGCTGCTCAAGTGATTTCAAGCCTAATGGTGCTGTCCCAGAATCGGAGAGAGGTTAAGAAGGATGATAAAAGTGTGCCAAATCTAGTCCAGTTGCTTGATCCAAGCCCTCAGAACACTGCAAAAAAGTATGCAGTTTCTTGCCTTGGATCACTCTCTCCAAGTAAGAAATGTAAGAAACTGATGATTTCGTATGGAGCAATAGGGTATCTGAAGAAGCTTACAGAGATGGACATTCCAGGAGCTAAAAAGCTACTTGAGAGGTTGGAAAGAGGGAAATTGAGAAGCTTGTTCAGCAGAAAGTAG 1050 0.4505 MQCCCFIGQLLTATSPQIREYTVTVICSLVESGSCEKWLCVGKEKATVSLQRLSMSAETMRAIVGHGGIRPLIELCQSGDSVSQAAAACTLANVSAVPEVRQALAEEGIVKVMINLLNCGILLGSKEYAAECLQNLTSSNEHLRKSVISEDGVRSLLAYLDGPLPQESEVGALRNLVGSVSEETFVSLGLLPRLVHVLKSGSLGAQQAAASIICRVCSSMEMKKTVGETGCIPLLIKMLEAKSNAAREVAAQVISSLMVLSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSPSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLLERLERGKLRSLFSRK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00926 349 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 27 347 - -
Pumo7g00926 349 SUPERFAMILY ARM repeat 9 329 IPR016024 -
Pumo7g00926 349 Gene3D - 39 181 IPR011989 -
Pumo7g00926 349 Pfam Armadillo/beta-catenin-like repeat 62 96 IPR000225 GO:0005515
Pumo7g00926 349 Gene3D - 182 329 IPR011989 -
Pumo7g00926 349 SMART arm_5 97 138 IPR000225 GO:0005515
Pumo7g00926 349 SMART arm_5 140 178 IPR000225 GO:0005515
Pumo7g00926 349 SMART arm_5 179 218 IPR000225 GO:0005515
Pumo7g00926 349 SMART arm_5 260 302 IPR000225 GO:0005515
Pumo7g00926 349 SMART arm_5 219 259 IPR000225 GO:0005515
Pumo7g00926 349 SMART arm_5 56 96 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00926 Pumo-Chr7 16595718 16596817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00926 12 268 U-box Gene Family AT3G54790 26.277 3.03e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00926 - - gmx:100809488 583.948