Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00925 ATGAAGGCGGTGTTAGGAGTCTTGTGGCTTTTTCTTGATGGTCCACTTCCCCAAGAATCTGCAGTTGGAGCATTGAGGAATCTGGTTGGATCAGTTTCTGAGGAAACTTTGGTTTCTCTTGGTTTGCTTCCCCGTTTGGTTCACGTGCTGAAGTCCAGATCATTGGGTGCTCAACAAGCCGCAACATCTATCATTTGCCGCATTTGCAGCTCAATGGAGATGAAGAAAATAGTTGGTGAAGCCGGGTGCATCCCTCTTCTTATAAAGATGCTTGAGGCTAAATCAAATACTGCTAGAGAGGTTGCCGCTCAAGCAATTTCGAGCCTAATGGTTCTTTCCCAGAACTGCAGAGAAGTTAGGAAGGATGATAAAAGTGTGCCAAATCTGGTCCAGTTGCTTGATCCTAGCCCTCAGAACACTGCAAAAAAGTATGCAGTTTCTTGCCTTGGATCACTTTCTCCAAGTAAGAAATGTAAGAAACTGATGATTTCATATGGAGCAATTAGGTATCTGAAGACATTCCAAGAGCTATAA 534 0.4363 MKAVLGVLWLFLDGPLPQESAVGALRNLVGSVSEETLVSLGLLPRLVHVLKSRSLGAQQAATSIICRICSSMEMKKIVGEAGCIPLLIKMLEAKSNTAREVAAQAISSLMVLSQNCREVRKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSPSKKCKKLMISYGAIRYLKTFQEL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00925 177 Gene3D - 97 174 IPR011989 -
Pumo7g00925 177 SUPERFAMILY ARM repeat 18 172 IPR016024 -
Pumo7g00925 177 SMART arm_5 112 154 IPR000225 GO:0005515
Pumo7g00925 177 SMART arm_5 30 70 IPR000225 GO:0005515
Pumo7g00925 177 SMART arm_5 71 111 IPR000225 GO:0005515
Pumo7g00925 177 Gene3D - 15 96 IPR011989 -
Pumo7g00925 177 Pfam Armadillo/beta-catenin-like repeat 73 109 IPR000225 GO:0005515
Pumo7g00925 177 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 10 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00925 Pumo-Chr7 16517465 16518773 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00925 46 171 U-box Gene Family AT2G23140 32.283 1.83e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00925 - - gmx:100798922 292.352