Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00914 ATGAGTTTTGGGGGTTTTTTAGACGACAAATCAGGTAGTGGCGGTGCCAGAAACAACGTTTCAGATATTCCTTACAACAACGTTACCACTACCAACCACAACACCAACAACAACGATAGAATGCCCTTTGTTGCAATCTCTCAGCCACGCCTTGTGACCACTACTCCCACTTTGGCCAAATCCATGTTCAACTCTCCAGGGCTATCTCTGGCACTTCAGCAAACCAATATAGATGGACAAGAAGATGTGAATAGGATGGCCGAGAATAACTTCGAACCGAACGGGTTGAGAAGAAGCCGAGAAGATGAACATGAAAGCAGATCTGGCAGCGACAACATGGACGGCGCTTCCGGCGATGAACACGACGCCGCCGACAACCCTCCGAGGAAAAAACGCTATCACCGACACACCCCTCAGCAGATACAAGAACTTGAAGCGTTGTTCAAGGAGTGTCCTCATCCAGATGAGAAGCAAAGACTCGAACTGAGCAAGAGGTTAAGCTTGGAAACTCGTCAAGTGAAGTTTTGGTTCCAAAATCGTCGAACCCAAATGAAGACCCAGTTGGAGCGGCACGAGAACACGTTGCTGAGGCAAGAGAACGACAAGCTCAGAGCGGAGAACATGTCCATCAGAGACGCAATGAGGAACCCCATGTGCTCCAATTGCGGTGGCCCAGCCATCATCGGAGAAATCTCGCTGGAGGAGCAGCACCTTCGGATCGAGAACGCGCGGTTGAAGGACGAACTCGACCGCGTGTGTGCACTCGCGGGCAAGTTCTTGGGGCGCCCCGTTTCTTCGTTACCAAACTCAAGTTTAGAGCTTGGTGTGGGAGGGAACGGGTTTGCCGGAATCAGCACCATGCCAGCGGTCACATTGCCATTGGGGCAAGATTTTGCAATGGGAATGTCTGTGTCAATGAATAATAATCCGTTGGGGATGGTGTCTCCTCCGAGTAGTACTAGGCCGGTGGCGGCGGTGGCCGGGTTCGATAGGTCGGTGGAGAGGTCGATGCTTCTTGAGCTTGCCTTGGCTGCTATGGATGAGTTGGTGAAGATGGCGCAGACTGGGGAGCCTCTTTGGATGAGGAATGTTGAAGGAGGGAGGGAGATTTTGAACCATGAGGAGTACGTGAGGAGGTTCATTCCTTGCATTGGTTTGAGACCCAATGGGTTTGTCTCTGAGGCCTCTAGGGAAAATGGGATGGTCATCATTAACAGCTTGGCACTTGTTGAGACTCTTATGGACTCGAATCGATGGGCAGAGATGTTTCCTTGTGTCATTGCCAGAACCACCACCACTGAAGTGATATCAAATGGAATAAACGGGACAAGAAATGGAGCACTTCAATTAATGCATGCTGAACTTCATGTTCTTTCTCCTTTGGTGCCGGTTCGTGAGGTGAATTTTCTCCGGTTTTGCAAGCAGCACGCAGAAGGGTTGTGGGCTGTGGTGGATGTGTCCATAGATAGCATCAGAGAAAGTTCCGGAGCACCCACTTTTTTGAACTGTAGGAGGCTTCCTTCTGGTTGTGTGGTGCAAGATATGCCCAATGGTTACTCCAAGGTTACATGGGTGGAGCATGCAGAATACGATGAAAGCCAAGTTCACCAGCTCTATAGACCTTTGTTGAGCTCAGGCATGGGGTTTGGTGCCCAACGTTGGGTCGCTACCCTACAACGCCAATGCGAGTGCCTTGCGATCCTAATGTCCTCTGCAGCACCCTCTAGAGATCATTCCGCAATAACAGCGGGGGGAAGGCGCAGCATGCTGAAGCTGGCGCAGCGGATGACGAACAACTTCTGCGCGGGGGTGTGCGCGTCGACGGTGCACAAGTGGAACAAGCTCAACGCCGGCAACGTCGACGAGGACGTCAGGGTCATGACTCGCAAGAGCGTCGACGACCCGGGGGAGCCACCCGGGATCGTCCTCAGCGCCGCCACCTCCGTCTGGCTCCCCGTCTCCCCCAACCGCCTCTTCGATTTCCTCCGCGACGAGCGCCTCCGCAGCGAGTGGGACATCCTCTCCAACGGCGGCCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAAGACCACGGCAACTGCGTCTCTCTCCTTAGAGCCAGTGCGATAAATTCCAACCAGAGTAGCATGTTGATACTGCAGGAGACATGCATAGACGCGGCGGGGTCGCTTGTAGTGTACGCGCCGGTTGATATCCCAGCCATGCACGTGGTGATGAACGGTGGCGATTCGGCTTACGTGGCACTGTTACCTTCAGGGTTCGCGATTGTCCCCGATGGGCCCGGGTCTCGTGGGCCGCAGAACGGGCCCACTAGCACAACAAACGGCGGTGATAACGGCGTGACGCGCGTGAGTGGGTCCCTCCTAACGGTGGCGTTTCAGATCCTTGTGAATAGTCTCCCTACGGCGAAGCTCACGGTAGAGTCCGTGGAAACCGTGAACAACCTCATCTCCTGCACGGTTCAGAAGATCAAAGCCGCGCTCCACTGTGAAAGTTAA 2502 0.5388 MSFGGFLDDKSGSGGARNNVSDIPYNNVTTTNHNTNNNDRMPFVAISQPRLVTTTPTLAKSMFNSPGLSLALQQTNIDGQEDVNRMAENNFEPNGLRRSREDEHESRSGSDNMDGASGDEHDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLSLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSLPNSSLELGVGGNGFAGISTMPAVTLPLGQDFAMGMSVSMNNNPLGMVSPPSSTRPVAAVAGFDRSVERSMLLELALAAMDELVKMAQTGEPLWMRNVEGGREILNHEEYVRRFIPCIGLRPNGFVSEASRENGMVIINSLALVETLMDSNRWAEMFPCVIARTTTTEVISNGINGTRNGALQLMHAELHVLSPLVPVREVNFLRFCKQHAEGLWAVVDVSIDSIRESSGAPTFLNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPNRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINSNQSSMLILQETCIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGPQNGPTSTTNGGDNGVTRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00914 833 ProSitePatterns 'Homeobox' domain signature. 162 185 IPR017970 GO:0000981|GO:0006355
Pumo7g00914 833 Coils Coil 181 213 - -
Pumo7g00914 833 Gene3D - 116 203 - -
Pumo7g00914 833 MobiDBLite consensus disorder prediction 89 137 - -
Pumo7g00914 833 ProSiteProfiles START domain profile. 331 567 IPR002913 GO:0008289
Pumo7g00914 833 CDD START_ArGLABRA2_like 335 563 - -
Pumo7g00914 833 SUPERFAMILY Bet v1-like 592 826 - -
Pumo7g00914 833 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 126 830 IPR042160 -
Pumo7g00914 833 MobiDBLite consensus disorder prediction 766 780 - -
Pumo7g00914 833 MobiDBLite consensus disorder prediction 14 40 - -
Pumo7g00914 833 MobiDBLite consensus disorder prediction 760 780 - -
Pumo7g00914 833 Pfam START domain 340 564 IPR002913 GO:0008289
Pumo7g00914 833 SUPERFAMILY Homeodomain-like 113 187 IPR009057 -
Pumo7g00914 833 FunFam Homeobox-leucine zipper protein GLABRA 2 340 563 - -
Pumo7g00914 833 Pfam Homeodomain 130 185 IPR001356 GO:0003677
Pumo7g00914 833 SMART HOX_1 128 191 IPR001356 GO:0003677
Pumo7g00914 833 SMART START_1 340 564 IPR002913 GO:0008289
Pumo7g00914 833 FunFam Homeobox-leucine zipper protein HDG1 117 203 - -
Pumo7g00914 833 CDD homeodomain 129 187 IPR001356 GO:0003677
Pumo7g00914 833 ProSiteProfiles 'Homeobox' domain profile. 127 187 IPR001356 GO:0003677
Pumo7g00914 833 MobiDBLite consensus disorder prediction 94 129 - -
Pumo7g00914 833 MobiDBLite consensus disorder prediction 1 40 - -
Pumo7g00914 833 SUPERFAMILY Bet v1-like 333 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00914 Pumo-Chr7 16017666 16025917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00914 1 833 Homeobox Transcription Factor Family AT3G61150 65.599 0.0 1048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pumo7g00914 START 3.6e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00914 K09338 - gmx:100811873 1548.87