Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00913 ATGAATATGATGCGAAGGTTGAAGAGCATTGCTTCTGGGAGGACTTCCATTTCTTCAGATCCTGGAGGGGATTCTAACTCAAAAAGAGCCAAGTTTGAACCAGAAACTGAAGTGAAGGCGGATGAGAAAACAAATACCGTTGAGACAGTCTGCACAGATCAGGAGCAGCAGCATTTAGCTGCATCAAAAGAAACTTCCAATGTAGGCACATCCGATGTATCTACAGTAGCTAGAACTGAGAAGCCTGGTTATGAAGAGCTTCCTAAAGAATTAAATGAAATGAAAATTAGAGATGAGAAAAGCAAAAACAACAATGAAAAGGATATAGAAGCAACTGTAGTGAGCGGTAATGGAACAGAAACAGGTCAAATAATTACAACTGCCATTGGTGGTCGAGATGGACAACCAAAGCAGACAATCTCTTACATGGCTGAACGTGTGGTTGGGACTGGTTCTTTTGGTGTTGTGTTTCAGGCTAAGTGCCTTGAAACTGGTGAATCTGTCGCCATAAAGAAGGTGTTGCAAGACAGGAGATATAAGAATAGGGAACTCCAGGTTATGCGCACAGTTGACCATCCTAATGTTGTTAAACTAAAGCACTGCTTCTTTTCAACTACCGATAAAGATGAATTGTACCTTAACCTGGTTTTGGAGTATGTACCTGAAACTGTCTACAAAGTTTCAAAACACTATGTTAGGATGCACCAACACATGCCTATCATTTATGTGCAACTGTATACCTACCAAATATGTCGTGCATTAAATTATTTACATCAAGTGATTGGTGTCTGTCATCGTGACATCAAACCCCAGAACCTATTGGTAAATCCCCAGACGCATGAGTTAAAAATATGCGATTTTGGGAGCGCAAAGGTGTTGGTGCCCGGTGAACCGAACATATCATACATATGCTCTCGATATTATAGAGCTCCAGAACTTATATTTGGGGCAACTGAATACACAACTGCTATTGATATGTGGTCTGTTGGTTGTGTTTTAGCTGAGCTGCTTCTAGGACAGCCATTGTTTCCTGGAGAGAGTGGGGTTGATCAGTTAGTAGAGATCATTAAGATCTTGGGAACGCCAACTAGGGAAGAAATAAGGTGCATGAATCCAAACTACAATGAATTTAAGTTTCCTCAGATTAAAGCTCACCCATGGCACAAGGTTTTTCACAAGAGAATGCCGCCTGAAGCCGTGGATCTTGTGTCAAGGCTGCTTCAGTATTCACCAAATTTACGTTGCACTGCTTTGGCTGCATGTGCTCATCCCTTCTTTGATGATCTCCGGGACCCGAATGCATGCTTGCCGAACGGGCGACCACTACCTCCTTTGTTCAACTTCACATCTCAAGGTGAGATAGTTTCTGAACTTACCAATTTTTGGTTAAATGATACATTTGTCGCCGTTGGCATTGCTAATACACCCCTCACCGGCATCACCAACGACCTGTCCAGGTCTGTTCTTCAGCCTCTTCTGCACAAGTCACAACTGTGA 1497 0.4248 MNMMRRLKSIASGRTSISSDPGGDSNSKRAKFEPETEVKADEKTNTVETVCTDQEQQHLAASKETSNVGTSDVSTVARTEKPGYEELPKELNEMKIRDEKSKNNNEKDIEATVVSGNGTETGQIITTAIGGRDGQPKQTISYMAERVVGTGSFGVVFQAKCLETGESVAIKKVLQDRRYKNRELQVMRTVDHPNVVKLKHCFFSTTDKDELYLNLVLEYVPETVYKVSKHYVRMHQHMPIIYVQLYTYQICRALNYLHQVIGVCHRDIKPQNLLVNPQTHELKICDFGSAKVLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIRCMNPNYNEFKFPQIKAHPWHKVFHKRMPPEAVDLVSRLLQYSPNLRCTALAACAHPFFDDLRDPNACLPNGRPLPPLFNFTSQGEIVSELTNFWLNDTFVAVGIANTPLTGITNDLSRSVLQPLLHKSQL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00913 498 MobiDBLite consensus disorder prediction 26 48 - -
Pumo7g00913 498 Pfam Protein kinase domain 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00913 498 SUPERFAMILY Protein kinase-like (PK-like) 141 456 IPR011009 -
Pumo7g00913 498 Gene3D Transferase(Phosphotransferase) domain 1 222 462 - -
Pumo7g00913 498 MobiDBLite consensus disorder prediction 9 25 - -
Pumo7g00913 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Pumo7g00913 498 SMART serkin_6 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00913 498 FunFam Shaggy-related protein kinase kappa 222 465 - -
Pumo7g00913 498 MobiDBLite consensus disorder prediction 49 77 - -
Pumo7g00913 498 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 102 457 - -
Pumo7g00913 498 MobiDBLite consensus disorder prediction 1 77 - -
Pumo7g00913 498 FunFam Glycogen synthase kinase-3 beta 126 221 - -
Pumo7g00913 498 Gene3D Phosphorylase Kinase; domain 1 127 221 - -
Pumo7g00913 498 CDD STKc_GSK3 137 429 IPR039192 -
Pumo7g00913 498 ProSitePatterns Protein kinases ATP-binding region signature. 148 172 IPR017441 GO:0005524
Pumo7g00913 498 ProSiteProfiles Protein kinase domain profile. 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00913 Pumo-Chr7 15998567 16003205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00913 148 429 Core Cell Cycle Gene Families AT1G76540 35.836 5.41e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pumo7g00913 Pkinase 2.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00913 K00924 - gmx:100811346 887.871