Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00895 ATGCCTCGTGGAACGCTTGAAGTTGTTCTGATCAGCGCCAAAGGCATCGATGACAATGATTTTCTCTCCAGCATAGATCCTTATGTGATTCTCACATACAGGGCACAGGAGAAAAAGAGCACTGTGCAAGAAGATGCTGGATCCAAGCCACAATGGAATGAGAGCTTTCTTTTCACTGTCTCTGACAGTGCTTCTGAACTTGTTCTAAAGATAATGGACAAAGACAACTTTTCTCAAGATGATACTCTTGGCGAGGCAACCATTCATTTAGATCCAGTGTTTGAAGCGGGTAGCATTCCGGAAACTGCCTACAAGGTCGTGAAGGACGAAGAATATTGTGGAGAGATTAGGGTGGCTCTCACTTTTACTGCTGAGAAAAATGAGGAGCAGGGTTATGGTGCACCTGAACAGAGCTATGGTGGATGGAAAGAATCGAGTGGGGAATTTTAA 450 0.4444 MPRGTLEVVLISAKGIDDNDFLSSIDPYVILTYRAQEKKSTVQEDAGSKPQWNESFLFTVSDSASELVLKIMDKDNFSQDDTLGEATIHLDPVFEAGSIPETAYKVVKDEEYCGEIRVALTFTAEKNEEQGYGAPEQSYGGWKESSGEF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00895 149 SMART C2_3c 5 102 IPR000008 -
Pumo7g00895 149 MobiDBLite consensus disorder prediction 127 149 - -
Pumo7g00895 149 Pfam C2 domain 4 97 IPR000008 -
Pumo7g00895 149 PANTHER C2 DOMAIN-CONTAINING 1 131 - -
Pumo7g00895 149 Gene3D C2 domain 2 124 IPR035892 -
Pumo7g00895 149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 124 IPR035892 -
Pumo7g00895 149 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00895 Pumo-Chr7 15644060 15646730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00895 4 127 C2H2 Transcription Factor Family AT4G21160 30.645 8.30e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00895 - - gmx:100500006 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00895 7 15644060 15646730 Pumo7g00895 7 15644060 15646730 ECH