Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00853 ATGGGTATTCAGTGCTCCAGATTCATCCCATGCTGTGCGGATTCACAAGTTAAGGCATCTGTTATTGAAACTCCAGATGCTGAAATTGAGGATAGTAGTGAGGTCAGTAACTGGCCTACATTCCGTGAATTTACTCTTGAGCAACTTAAGAACGCAACATCTGGTTTTGCTGTTGAGAACATTGTATCTGAACATGGAGAGAAGGCTCCAAATGTTGTTTATAAAGGAAAGCTGGAGAATCAAATAAGGATTGCTGTTAAGCGGTTTAATAGGAATGCTTGGCCCGATGCTCGGCAGTTTTTGGAGGAAGCAAGATCAGTTGGTCAGCTTCGTAACCAAAGATTGGCAAATTTGCTTGGTTGTTGCTGTGAAGGAGATGAGAGGTTGCTTGTGGCAGAATATTTGCCCAATGAAACACTTGCAAAGCACCTTTTCCATTGGGAAACACAACCTATGAAATGGGCAATGCGACTAAGAGTTGTTCTACATCTTGCACAAGCTCTAGAGTACTGCACAAGCAAAGGGCGTGCTCTCTATCATGACCTTAATGCATATAGAGTTCTTTTTGATGAGGATGGTAATCCTAGGCTTTCGAGTTTTGGTCTTATGAAAAACAGCAGGGATGGAAAAAGTTATAGCACAAATCTGGCATTTACCCCTCCAGAGTACCTCAGAACTGGGAGAGTAACACCAGAAAGTGTAATATATAGCTTCGGCACTCTTTTGCTTGACCTTCTCAGTGGGAAGCATATCCCCCCAAGTCATGCCCTTGATGTGATTCGCGGAAGAAATCTTCAGATGCTGACAGATTCTTGTTTGGAAGGACAATTTTCAGATGACGATGGAACTGAGTTGGTACGCTTGGCATCTCGATGTTTACAGTATGAACCTAGAGAACGGCCTAATCCAAAATCATTGGTAGCTGCTTTGGCTCCTCTTCAGAAGGAAACAGAGGTTCCTTCACATGTCTTGATGGGCATCCAGCATAGTACTACTTTTGCTTCATTATCTCCACTTGGTGAAGCATGCTCAAGAAAGGACCTGACTGCCATACATGAAGTTCTGGAAAATATTGGCTATAAAGATGATGAAGGAGTGGCAAATGAGTTATCATTTCAGATGTGGACTGATCAAATGCAAGAAACATTAAATTGCAAGAAAAAGGGGGATGTTGCTTTCCGGCAGAAAGATTTTAGACTAGCAATTGAGTGCTACTCGCAGTTCATTGATGCTGGAACAATGGTTTCTCCAACAGTCTACGCACGGCGCAGTTTGTGTCATCTCATCAGTGACATGCCTCAGGAAGCGCTGAACGATGCAATGCAGGCGCAAGTCGTTTCCCCGGTATGGCACATAGCATCGTATCTTCAATCTGTTGCCCTCACAGGACTTGGGATGGAGAATGAAGCCCAAGCAGCACTCAAAGAGGGCTCAACACTGGAATCCAAGCGGAATGCAACTTCCAAGCAAAAATGA 1476 0.4377 MGIQCSRFIPCCADSQVKASVIETPDAEIEDSSEVSNWPTFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQIRIAVKRFNRNAWPDARQFLEEARSVGQLRNQRLANLLGCCCEGDERLLVAEYLPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHVLMGIQHSTTFASLSPLGEACSRKDLTAIHEVLENIGYKDDEGVANELSFQMWTDQMQETLNCKKKGDVAFRQKDFRLAIECYSQFIDAGTMVSPTVYARRSLCHLISDMPQEALNDAMQAQVVSPVWHIASYLQSVALTGLGMENEAQAALKEGSTLESKRNATSKQK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00853 491 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Pumo7g00853 491 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Pumo7g00853 491 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00853 491 SUPERFAMILY TPR-like 383 481 IPR011990 GO:0005515
Pumo7g00853 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 21 485 IPR045845 GO:0004672|GO:0009742
Pumo7g00853 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Pumo7g00853 491 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Pumo7g00853 491 SUPERFAMILY Protein kinase-like (PK-like) 34 317 IPR011009 -
Pumo7g00853 491 Gene3D Tetratricopeptide repeat domain 380 491 IPR011990 GO:0005515
Pumo7g00853 491 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Pumo7g00853 491 FunFam probable serine/threonine-protein kinase At4g35230 380 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00853 Pumo-Chr7 15024095 15030873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00853 30 313 Glycoside Hydrolase AT3G07070 33.013 7.12e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pumo7g00853 PK_Tyr_Ser-Thr 2.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00853 K14500 - gmx:100799260 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g00853 7 15024095 15030873 Pumo7g00853 7 15024095 15030873 ECH