Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00830 ATGACCAGTAGGAGAGAAATTGTAAATGAGCCTAGTCCAAGTATGGTTAATGACACAATCTATGTTGCTGTGGCAAAAGATGTGAAAGATAGCAAATTAAATCTCATATGGGCAATACAAAACTCTGGAGGAAAGAGAATTTGCATCCTTCATGTTCACGTGCCAGCACCTATGATCCCCTTGATGGGTGCTAAATTTCCTGCAAGTTCACTGAGAGAGGAGGAAGTTCAAGATTACCACGAAAGAGAAAGGCTAAAAATGCACAAGACTTTGGATGACTATCTTTTTATCTGTCAAAGGATGGGGGTAAGAGCCAGGAAAATACACATTGAAATGGATTGCATAGAAAAAGGAATTGTAGAACTCATCTCCCAGTATGGCATACAGAAGCTTGTAATGGGAGCGGCATCTGATAAGTACCATTCAAGGAGGATGACAGCCCTCAGATCTAAGAAAGCTATACATGTATGTGAACAAGCTCCAGCTTCATGTCATATACAGTTTATCTGCAACGGGTACCTCATACACACAAGGGATTGTAGTTTGGATAGAGGGAGAGTAGAGGTTGCATCTCCTTTGGTGCAGCAAATGGCAAACTCTGAAGTTGGGCATTCACCTAACTTTAGACCCCAATCTATTGTGCAAGGGCAAAATCATTGGATAAAACTAACTAATCCAGCTCAAGATTTATTTCGTAGAGTAAGGTCTATCAATGATGGACATAGGAGGAGCCTTGGATCTGTTTCTTCTTCAGAAGGGTTTTTAACTCCACAGAGCAAGTTCAGTAAAGAAGTAAGTGCTGATGAGTTAGATGGGCGGTCACGGCGGAGTCCTTCAGTTTTCTCAATGTGCTCTGACAGTAGTTCAGTTGAACCAGGATTGACCCCAAATTTGATTAATGATGGCAGTGAGAATGCATTAGACTTGATTTTGAATGGCCCTTCTCTGATTAATGAGGATCTTCATCATTCATCATCTCCTAGTGCACCGAACAGGCAATGGCTGAGGCTGCGAATGCTAGGCGGGATGCATATCAAGAAACTGTTAGGTAGTGGGAAAGCTGAAAAAGATGCCGTTGATGCTATTCGCAGGGCTAAAGCCACTGAAAACTTGTATAAAGAAGAGCTGAAACTAAGGAAAGAACAAGAAGAAGCAGTAGAGAAAGCAAATGAAGAACTTAATAACATGAAGAGCCAGACAGACAAAGTTGATGAGGAACTCCGACTTGCCTTAGATCAGAAGTCATCACTAGAGAATCAAATTGCATCAACTCAACTAATGATAAAGGAGTTGGAGCAAAAGATTATATCCGCCAAGGACATGTTACAAAACTACAAGGATGAACTAGATGATTTGCAAATACAGCGTGATAATGCAGTGGGAGAGGCTGAGGAGCTAAGGAGAAAACAAGTGGAAGCCTCATCAAGTGCACACGAGCTTCAACGCTTCTCAGAATTTTCCTTTCAAGAGATTAAACAAGCAACAAGTAACTTCAATCCATCCCAGAAGATCGGAGAAGGCGGATATGGAAGTATATACAAAGGTATCTTGCGTCACGCTGAGGTGGCTATAAAAATGTTGAATCCTGACAGCACACAAGGACCTGTGGAGTTTCAACAGGAGGTTGAAGTATTGAGCAAGTTAAGGCATCCCAATATTATCTCACTTATAGGAGCCTGCCCAGAAACTTGGACTCTTGTATATGAGTATTTACCCAATGGAAGCCTTGAAGATCGTCTCAACTGCAAGGATAACACACCTCCCTTATCATGGCAAACTCGAATTCGCATTGCTGCAGAACTTTGTTCTGCTCTCATTTTTCTTCACTCCAATAAACCTCACAGCATAGCACATGGCGACTTGAAACCAGCCAACATTCTCCTTGATGCAAACCTTGTCAGCAAGCTCAGTGACTTTGGAATCTCTCGTATATTATCCTGTCAAGAGAGTTCTAGTGACAGTGCTACACAGTTCTGGAGGACTGTTCCAAAGGGAACTTTTGTGTATGTGGATCCTGAATTCTTTGCTACTGCTGAACTTACACCAAAGTCAGATGTTTATTCATTTGGAATCATTCTGTTGAGACTGATGACTGGGAAACCAGCCCTGGGAATAACAAAGGAAGTGCAATATGCATTAGGTGCTGGAAAGTTGAAAAACATCTTGGATCCTTTGGCTGGAGACTGGCCATTTATGCTAGCTGAAGAGTTGGTTCGCTTGGCTTTGAGGTGTTGTGAGATGAATCGAAAGAGCCGGCCAGACCTTTATCCAGATGTATGGAGGATACTGGAACCAATGAGGGCTTCTTCTGGAAAAACTAACACCTATCAACTGGGTTCTCAAGGGCTTTGTCAACCTCCTCCATATTTCATTTGTCCAATCTTTCTGGAAGTCATGCAAGATCCACATGTAGCTGCGGATGGTTTTACTTATGAAGCTGAGGCTATACGTGAATGGCTGGAAAGTGGTCATGACACTTCACCAAGGACAAATTCCAAGCTTGCACATCGCAATCTTGTTCCCAACCACGCTCTTCGCCATGCAATCCAGGACTGGCTTCAAAGTCACTGA 2571 0.4255 MTSRREIVNEPSPSMVNDTIYVAVAKDVKDSKLNLIWAIQNSGGKRICILHVHVPAPMIPLMGAKFPASSLREEEVQDYHERERLKMHKTLDDYLFICQRMGVRARKIHIEMDCIEKGIVELISQYGIQKLVMGAASDKYHSRRMTALRSKKAIHVCEQAPASCHIQFICNGYLIHTRDCSLDRGRVEVASPLVQQMANSEVGHSPNFRPQSIVQGQNHWIKLTNPAQDLFRRVRSINDGHRRSLGSVSSSEGFLTPQSKFSKEVSADELDGRSRRSPSVFSMCSDSSSVEPGLTPNLINDGSENALDLILNGPSLINEDLHHSSSPSAPNRQWLRLRMLGGMHIKKLLGSGKAEKDAVDAIRRAKATENLYKEELKLRKEQEEAVEKANEELNNMKSQTDKVDEELRLALDQKSSLENQIASTQLMIKELEQKIISAKDMLQNYKDELDDLQIQRDNAVGEAEELRRKQVEASSSAHELQRFSEFSFQEIKQATSNFNPSQKIGEGGYGSIYKGILRHAEVAIKMLNPDSTQGPVEFQQEVEVLSKLRHPNIISLIGACPETWTLVYEYLPNGSLEDRLNCKDNTPPLSWQTRIRIAAELCSALIFLHSNKPHSIAHGDLKPANILLDANLVSKLSDFGISRILSCQESSSDSATQFWRTVPKGTFVYVDPEFFATAELTPKSDVYSFGIILLRLMTGKPALGITKEVQYALGAGKLKNILDPLAGDWPFMLAEELVRLALRCCEMNRKSRPDLYPDVWRILEPMRASSGKTNTYQLGSQGLCQPPPYFICPIFLEVMQDPHVAADGFTYEAEAIREWLESGHDTSPRTNSKLAHRNLVPNHALRHAIQDWLQSH 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00830 856 Pfam U-box domain 787 856 IPR003613 GO:0004842|GO:0016567
Pumo7g00830 856 PANTHER OS02G0152300 PROTEIN 20 851 - -
Pumo7g00830 856 Gene3D Phosphorylase Kinase; domain 1 468 570 - -
Pumo7g00830 856 FunFam receptor-like protein kinase FERONIA 462 570 - -
Pumo7g00830 856 CDD RING-Ubox_WDSUB1-like 787 842 - -
Pumo7g00830 856 SMART serkin_6 498 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00830 856 ProSitePatterns Protein kinases ATP-binding region signature. 504 525 IPR017441 GO:0005524
Pumo7g00830 856 Gene3D Transferase(Phosphotransferase) domain 1 571 769 - -
Pumo7g00830 856 SMART Ubox_2 789 852 IPR003613 GO:0004842|GO:0016567
Pumo7g00830 856 ProSiteProfiles U-box domain profile. 785 856 IPR003613 GO:0004842|GO:0016567
Pumo7g00830 856 MobiDBLite consensus disorder prediction 278 292 - -
Pumo7g00830 856 Pfam Protein kinase domain 500 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00830 856 Coils Coil 364 469 - -
Pumo7g00830 856 ProSiteProfiles Protein kinase domain profile. 498 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00830 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Pumo7g00830 856 SUPERFAMILY Protein kinase-like (PK-like) 475 755 IPR011009 -
Pumo7g00830 856 MobiDBLite consensus disorder prediction 263 292 - -
Pumo7g00830 856 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 37 138 - -
Pumo7g00830 856 SUPERFAMILY RING/U-box 782 855 - -
Pumo7g00830 856 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 785 856 IPR013083 -
Pumo7g00830 856 CDD STK_N 19 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00830 Pumo-Chr7 14722331 14727602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00830 7 856 U-box Gene Family AT2G45910 53.434 0.0 872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pumo7g00830 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00830 - - gmx:100780079 1404.04