Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00829 ATGGGTGGTAAGATTTTATACTCCGAGAAGTACTTCGATGATAAGTATGAATACAGACATGTGGTTCTGCCTCTTGAAGTCGGCAAACTGCTTCCCAAGAATCGGCTTCTCACAGAATCTGGATGGCGGAAAGTTGGGGTTCAGCAGAGCCGTGGTTGGCAGCATTATGCAGTTCATCGCCGTGAACCACACATATTGCTTTTCAGGAGGCCTTTGCAGCAGCCGCAGGAAAACGAGGCCTATCAAAGCATGGTTTCTCAAGTTGAAAATCTGAAAGTGGAAGAGAATTAA 291 0.4605 MGGKILYSEKYFDDKYEYRHVVLPLEVGKLLPKNRLLTESGWRKVGVQQSRGWQHYAVHRREPHILLFRRPLQQPQENEAYQSMVSQVENLKVEEN 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00829 96 SMART CKS_2 4 73 IPR000789 GO:0016538
Pumo7g00829 96 SUPERFAMILY Cell cycle regulatory proteins 3 81 IPR036858 GO:0016538
Pumo7g00829 96 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 4 90 - -
Pumo7g00829 96 Pfam Cyclin-dependent kinase regulatory subunit 5 71 IPR000789 GO:0016538
Pumo7g00829 96 Gene3D - 1 84 IPR036858 GO:0016538
Pumo7g00829 96 PRINTS Cyclin-dependent kinase regulatory subunit signature 4 18 IPR000789 GO:0016538
Pumo7g00829 96 PRINTS Cyclin-dependent kinase regulatory subunit signature 19 33 IPR000789 GO:0016538
Pumo7g00829 96 PRINTS Cyclin-dependent kinase regulatory subunit signature 41 55 IPR000789 GO:0016538
Pumo7g00829 96 PRINTS Cyclin-dependent kinase regulatory subunit signature 56 70 IPR000789 GO:0016538
Pumo7g00829 96 FunFam Cyclin-dependent kinases regulatory subunit 2 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00829 Pumo-Chr7 14574076 14574906 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00829 3 80 Core Cell Cycle Gene Families AT2G27970 73.077 4.53e-40 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00829 K02219 - gmx:547737 137.117