Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00804 ATGCTTCAAATGCTTCAAGAGCTGGTAGTCAGAGAGGGCGTGGCTCAAATCGAAGGTACCAGCATCAGTTCATACAACATAGTACAAGGGAAAGAACCTGGCATTGTGAAGTTCACCATGGAGGAAATCTTCAGAGTCACAAGAAACTTCTCCCCCTCTTTCAAGATTGGCCAAGGTGGTTTTGGTACTGTCTACAAGGCCAAACTCCTGGATGGGACTGTTGTTGCAGTAAAGCGTGCTAAGAAGAGTGTGTATGAGAAACATTTGGGGGTGGAGTTCCAGAGCGAGATCCAAACACTATCACGGGTGGAACATTTGAACTTAGTCAAGTTCTTTGGATATTTGGAGCAAGAAGATGAAAGAATCATTGTTGTGGAGTATGTTCCCAATGGAACCCTTAGAGAGCATTTAGATTGCATTCATGGAAGTGTTCTGGACCTTGCTGCTCGTCTGGATATAGCAATTGATGTTTCTCATGCCATCACCTATCTTCATATGTATATAGATCATCCTATCATTCATAGAGACATAAAATCTTCAAACATTCTTCTCTCTGAAAATTTTCGAGCTAAGGTAGCAGACTTTGGTTTTGCTAGACAAGCCGCTGACAGTGACTCTGGCATGACACATGTTTCCACCCAAGTAAAAGGAACAGCTGGCTACTTGGACCCTGAATACCTCAAAACTTATCAACTAACTGAAAAGAGTGACGTGTATTCATTTGGAGTTTTGCTTGTTGAACTTGTCACAGGCAGACGCCCCATTGAACCAAAATTTGAACTCAGGGAGCGAATCACGGCAAAATGGGCTATGAAGAGGTTCATTGAGGGAGATGCTATCTCAGTCTTGGACCCAAGACTGGATCAGACTGCTGCAAATACTTTGGCACTAGAAAAGATTCTTGAGCTAGCTTTACAGTGCTTGGCTCCTCGTAGACAAAGCAGGCCATCTATGAAGAGATGTGCTGAGGTCCTTTGGGCCATCCGCAAGGATTTCAGAGAGCAGCTATCAGCTTCAAACTTTCGCTCATTTTCCACTTCTTCCCAAAGAAGCACCTCAATGAAAGAGTGA 1071 0.437 MLQMLQELVVREGVAQIEGTSISSYNIVQGKEPGIVKFTMEEIFRVTRNFSPSFKIGQGGFGTVYKAKLLDGTVVAVKRAKKSVYEKHLGVEFQSEIQTLSRVEHLNLVKFFGYLEQEDERIIVVEYVPNGTLREHLDCIHGSVLDLAARLDIAIDVSHAITYLHMYIDHPIIHRDIKSSNILLSENFRAKVADFGFARQAADSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELRERITAKWAMKRFIEGDAISVLDPRLDQTAANTLALEKILELALQCLAPRRQSRPSMKRCAEVLWAIRKDFREQLSASNFRSFSTSSQRSTSMKE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00804 356 CDD STKc_IRAK 56 325 - -
Pumo7g00804 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Pumo7g00804 356 ProSiteProfiles Protein kinase domain profile. 50 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00804 356 ProSitePatterns Protein kinases ATP-binding region signature. 56 82 IPR017441 GO:0005524
Pumo7g00804 356 Pfam Protein kinase domain 55 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00804 356 PANTHER OS01G0750732 PROTEIN 21 343 - -
Pumo7g00804 356 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 128 339 - -
Pumo7g00804 356 Gene3D Phosphorylase Kinase; domain 1 13 127 - -
Pumo7g00804 356 PIRSF ILK 5 343 - -
Pumo7g00804 356 Gene3D Transferase(Phosphotransferase) domain 1 128 350 - -
Pumo7g00804 356 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 15 127 - -
Pumo7g00804 356 SMART serkin_6 50 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00804 356 SUPERFAMILY Protein kinase-like (PK-like) 26 328 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00804 Pumo-Chr7 14196772 14201023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00804 38 318 Receptor kinase-like Gene Family AT1G79620 45.965 3.44e-72 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pumo7g00804 Pkinase 2.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00804 - - gmx:100792034 605.134