Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00798 ATGGGATCTTCCAATGAAGGATCCTCTTCTTCCACCCTAACCTCAGGAAGGTCATGGTCCAACCATGTTTTCTTGAGTTTCAGGGGTGATGACACACGAAAAGGTTTCACAGACCATCTTTTTGCTTCACTAGAGAGAAGGGGGATCAAAACATTCAGGGATGATCATGATCTTGAGAGGGGAAAAGTGATATCAGTGGAACTCATGAAAGCCATTGAAGAGTCCATGTTTGCACTCATCATTCTCTCACCAAACTATGCCTCCTCAACATGGTGTTTGGATGAGCTACAACAGATTGTAGAGTGCAAGAAAGAAGTTTTTCCAATCTTCCATGGTGTGGACCCCTCTGATGTGAGGCATCAGGGAGGAAGCTTTGCCAAGGCTTTCGGAGAACATGAAGAGAAATTCAGAGGGGACAGAAAGAAGGTGGAAAGATGGAGACATGCCTTGAGACAAGTTGCAAGTTACTCTGGCTGGGACTCTAAGGATAAGCATGAGGCAGCACTGATTGAAACAATTGTTGGACATATACAGAAAAAATTAATTCCTAGATTGACATGTTGCATAGATAACCTTGTTGGGATTGAGTCACGGATGAAGGAAGTGTATTCAATAATGGGCTTAAGGTTAAATGATGTTCGCTTCATAGGAATATGGGGCATGGGAGGCATAGGTAAAACAACCATTGCTAGATTAGTCTACGAAGCAATCAAAGGGGATTTCAATGTTAGTTGCTTTCTTGAAAACATTAGAGAGGTTTCCAAGACAAATGGCTTAGTTCACATTCAAAAGGAACTTCTTTTTCATCTTAATGTAAGAAGCAGTGATTTTTATAATCTTCATGATGGGAAAAAGATAATAGCAAACTCTTTAAGCAACAAAAAGGTTCTTCTTATTCTTGATGATGTAAGTGAGTTAAGCCAATTGGAGAATTTAGCTGGAAAACAAGAATGGTTTGGTCCAGGGAGTAGAGTAATAATCACAACCAGAGATAAGCACCTGCTAAGAACACATGGAGTGGATATAGCTTGTAAGGCTAGAGGCTTACCCCAAAATGAAGCCCTTCAGCTCTTTTGTTTGAAAGCATTTAAACGAGATCAACCTGAAAAAGGGTATTTGAATTTGTGCAAAGAAGTGGTTGAATATGCAAGAGGCCTTCCATTGGCACTTGAGGTATTGGGTTCCCATCTTTATGGAAGAACCATTGAGGTTTGGCATAGTGCTTTAGAACAAATAAGAAGTTTTCCGCACTCCAAAATCCAAAATACACTGAAAATAAGTTATGACAGTTTACAACCTCCGTATCAGAAAATGTTTCTAGATATTGCCTGTTTCTTCAAAGGGATGGACATAGATGAAGTGAAAAATATCTTAAAAAATTGTGGTGATCATCCCGAAATTGGAATTGACATTTTGATTGAAAGATGTTTGGTAACTCTTGATAGGATGAAGAATAAGTTGGGGATGCATGATTTGCTACAAGAAATGGGTAGGAATATTGTATTTCAAGAATCTCCAAATGATCCTGGCAAACGTAGTAGATTGTGGTCTCAAAAAGACATTGATTATGTACTGACAAAAAACAAGGGAACTGATGAAATTCAAGGCTTAGTTCTGAACTTAGTTCAACCGTATGATTATGAAGGACGCTGGAGCACTGAAGCCTTCTCCAACACAAATCAGCTAAGGTTACTCATGTTATGTGATATGCAGCTTCCCCGTGGCCTCAACTGCCTTCCTAGTTCACTGAAAGTTCTTCACTGGAGAGGATGTCCTTTGAAAACCCTGCCATTTACTAATCAACTAGATGAAGTTGTTGACCTCAAATTGCCTCATAGCAGAATAGAACAACTTTGGCGTGGGACAAAGCTTCTGGAAAAGCTAAAGTCCATCAATTTGAGCTTTTCTAAGAACCTAAAGCAGTCCCCAGACTTTGTTGGGGTTCCAAATCTTGAATCATTGGTTCTTGAAGGTTGCACAAGTTTAACTGAGGTTCATCCATCCCTTGTACGCCATAAGAAACTTGTTATGATGAATTTAAAAGACTGCAAAAGGCTCAAAACTCTTCCAAGTAAAATGGAGATGAGTTCCTTGAAAGATTTAAATCTTTCTGGTTGCTCTGAATTTAAATATCTTCCAGAGTTTGGGGAAAGCATGGAACATTTGTCAGTGCTTTCTTTAGAGGGGACTGCTATATCTAAACTACCCATATCACTGGGATGTCTAGTTGGCCTTGCTCATTTGGTTTTGAAGAATTGCAAGAATCTTGTTTGCCTTCCAGATACCATTCATAAATTAAAGTCCCTCATAGTTCTGAATGTTTCTGGCTGCTCAAAACTCCGTAGCTTGCCAGAAGGTTTAAAGGAAATCAAGGGTTTGAAGGAACTTAGCGCCAGTGAAACTGCTATTGAAGAGCTACCTTCATGTATCTTTTGTCTGGAAAACCTCGAAGATATCTCATTTGCCGGGTGCAAAGGGCCAGTATCTAACTCAGTAAATGGATTTTTTCTCCCCTTTAAGTGGGTATTTGGGAATCAGCAAACTCCTACTGCGTTTAGATTACCACCTTCTAAACTGAACCTACCCTCTTTGTTGAGAATAAATTTAAGTTACTGCAATCTATCTGAAGAGTTAATCCCAGATGGTTTTTGTCACTTATCTTCATTGCTGCTTCTAGATCTCACTGGAAACAATTTTGTTAGCCTACCAAGTTGCATTTCCAAACTCCCAGAGCTTAAATATCTTATCCTAAACTGCTGTAAAAAGCTTCAAAGGTTGCCAGAGCTTCCTTCAAGCATACAACAATTGGATGCAGGCAATTGCACTTCATTGGAAACTTCCGAATTCAATCCATCCAAGCCATGCAGTCTCTTCACATCACCTACAAAATGGCATGTACCAAGAGAACTGAAAGGCCTTTTTGAGGAACTCCGTCTTCCCGACGCAAGATTTGACATGCTAATCACAGGGAGTGAAATTCCATCATGGTTTGTCCCTCAAAAATGTGTTTCATTTGCAAAAATACCAGTCCCTCATAATTGTCCTATGAATGAATGGGTGGGATTTGCTTTGTGCTTCCTGTTAGAAAGTTATGTTGTCCCACCTGAGGTGCACCATCATGAAGTTGAATGCTACTTGTTTGGACCTCATGGTAAGGTGTTCATCAGTTCCAGGATTTTACCTACCATGGAGCCATGGTACCCTCACCTTTATATTCTCTATTTGCCCTTTGATAAATTGCGTGACATAATTTATGAAGGTGGTGAGTGCAGTGAAATTGAATTTGTATTGAAAAGGTATTGTTGTTATTCATTGGAAATAGTGAGGTGTGGGTGTCGTTTGGTATGTAAGCAAGATGTTGAAGGTAGTATAATTTCTTCTAGTGAAGAGTTCGGATTGGCCAGTTAG 3408 0.3961 MGSSNEGSSSSTLTSGRSWSNHVFLSFRGDDTRKGFTDHLFASLERRGIKTFRDDHDLERGKVISVELMKAIEESMFALIILSPNYASSTWCLDELQQIVECKKEVFPIFHGVDPSDVRHQGGSFAKAFGEHEEKFRGDRKKVERWRHALRQVASYSGWDSKDKHEAALIETIVGHIQKKLIPRLTCCIDNLVGIESRMKEVYSIMGLRLNDVRFIGIWGMGGIGKTTIARLVYEAIKGDFNVSCFLENIREVSKTNGLVHIQKELLFHLNVRSSDFYNLHDGKKIIANSLSNKKVLLILDDVSELSQLENLAGKQEWFGPGSRVIITTRDKHLLRTHGVDIACKARGLPQNEALQLFCLKAFKRDQPEKGYLNLCKEVVEYARGLPLALEVLGSHLYGRTIEVWHSALEQIRSFPHSKIQNTLKISYDSLQPPYQKMFLDIACFFKGMDIDEVKNILKNCGDHPEIGIDILIERCLVTLDRMKNKLGMHDLLQEMGRNIVFQESPNDPGKRSRLWSQKDIDYVLTKNKGTDEIQGLVLNLVQPYDYEGRWSTEAFSNTNQLRLLMLCDMQLPRGLNCLPSSLKVLHWRGCPLKTLPFTNQLDEVVDLKLPHSRIEQLWRGTKLLEKLKSINLSFSKNLKQSPDFVGVPNLESLVLEGCTSLTEVHPSLVRHKKLVMMNLKDCKRLKTLPSKMEMSSLKDLNLSGCSEFKYLPEFGESMEHLSVLSLEGTAISKLPISLGCLVGLAHLVLKNCKNLVCLPDTIHKLKSLIVLNVSGCSKLRSLPEGLKEIKGLKELSASETAIEELPSCIFCLENLEDISFAGCKGPVSNSVNGFFLPFKWVFGNQQTPTAFRLPPSKLNLPSLLRINLSYCNLSEELIPDGFCHLSSLLLLDLTGNNFVSLPSCISKLPELKYLILNCCKKLQRLPELPSSIQQLDAGNCTSLETSEFNPSKPCSLFTSPTKWHVPRELKGLFEELRLPDARFDMLITGSEIPSWFVPQKCVSFAKIPVPHNCPMNEWVGFALCFLLESYVVPPEVHHHEVECYLFGPHGKVFISSRILPTMEPWYPHLYILYLPFDKLRDIIYEGGECSEIEFVLKRYCCYSLEIVRCGCRLVCKQDVEGSIISSSEEFGLAS 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00798 1135 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 159 IPR035897 -
Pumo7g00798 1135 Pfam TIR domain 22 182 IPR000157 GO:0007165
Pumo7g00798 1135 Pfam Leucine Rich Repeat 606 623 IPR011713 -
Pumo7g00798 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 442 IPR027417 -
Pumo7g00798 1135 SUPERFAMILY L domain-like 489 949 - -
Pumo7g00798 1135 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 715 IPR044974 GO:0006952
Pumo7g00798 1135 Gene3D Ribonuclease Inhibitor 844 1034 IPR032675 -
Pumo7g00798 1135 SMART till_3 20 156 IPR000157 GO:0007165
Pumo7g00798 1135 Gene3D - 181 339 IPR027417 -
Pumo7g00798 1135 PRINTS Disease resistance protein signature 383 397 - -
Pumo7g00798 1135 PRINTS Disease resistance protein signature 215 230 - -
Pumo7g00798 1135 PRINTS Disease resistance protein signature 693 709 - -
Pumo7g00798 1135 PRINTS Disease resistance protein signature 290 304 - -
Pumo7g00798 1135 Pfam C-JID domain 989 1121 IPR045344 -
Pumo7g00798 1135 FunFam Disease resistance protein (TIR-NBS-LRR class) 350 432 - -
Pumo7g00798 1135 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 183 - -
Pumo7g00798 1135 SMART LRR_typ_2 886 909 IPR003591 -
Pumo7g00798 1135 SMART LRR_typ_2 719 742 IPR003591 -
Pumo7g00798 1135 SMART LRR_typ_2 861 885 IPR003591 -
Pumo7g00798 1135 SMART LRR_typ_2 790 813 IPR003591 -
Pumo7g00798 1135 Gene3D Ribonuclease Inhibitor 538 835 IPR032675 -
Pumo7g00798 1135 Gene3D - 340 432 IPR042197 -
Pumo7g00798 1135 Pfam NB-ARC domain 211 431 IPR002182 GO:0043531
Pumo7g00798 1135 Gene3D - 15 180 IPR035897 -
Pumo7g00798 1135 ProSiteProfiles TIR domain profile. 19 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00798 Pumo-Chr7 14060781 14065043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00798 28 834 WRKY Transcription Factor Family AT4G12020 31.522 6.54e-106 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00798 - - gmx:100815486 1962.19