Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00792 ATGGCAGCTGTTAGGTCTTCCTCTGTTAGACGGTTAGGAAGCACAATCAAGGGTTCTTTCAATATGGAATTAGTTCAAGACTGTCACTATCACCATAGTGTGTTTATGAACCTTGCAAGGTTGCCAAGTGATTCGTTGAATTATCCTTATTACAAAAGAGATTTACAGTTTGCTAAGAATCAGTTTAGTAATTTGGCTTCTGAATCTCTTGGAAGTAGTCACCACTTTGGTACTAGAGCCAATGTATCGGTTAATCCTAGATTCTCTAGTTATTGTTTTCGGAGTGCCCTTCCTTTTGCTTCCACGAGCCACGTGCTGAATGGGCGAATGTATTCGTCGTCGGTGGGTGACAAAGGAAGTAGAGATGGTGGCACAGAAGTTGCTGCTGGTTCTGGTGCGAGTGATATGAATACCGCTGGTGATTCTGTTGTTGCGGGTGATTGGGCTGAGAGGATTAAAGATGCTTGGAAGAGTGTGGCAGAGGCAGCATCATATGCTGGGGATAAGGTTAAAGAAACTTCTGATGATCTCACTCCATATGCTCAGCAATTGCTTGATTCACACCCGTATCTTGACAAGGTGGTTATTCCAGTTGGTGGTACTTTAACTGCTACTATACTAGCTTGGTTCTTGCTGCCTAGGATTTTGAGGAAATTTCACAAATATGCAATGCAAGGTCCCGTTTCTCTATTGCCAGGAAGCATATCTGGGGATCTAGTTCCTTATGAGAAAAGCTTTTGGGGTGCTATGGAGGATCCAGTGCGATATTTAGTTACCTTCATTGCATTCTCACAAATTGGTGTAATGGTGGCTCCAACAACTATAACCTCAGAATATCTTGCACCCGTTTGGAGGGGTGCAGTGATAGTTTCATTTGTATGGTTTTTGCATAGATGGAAAACAAATGTTTTTGCACGGACATTGTCCAGTCAAAGTTTACTTGGACTTGATAGGGAGAAAGTGCTTGCTCTAGACAAAATCTCATCTATTGGTCTATTTGTGATTGGTATAATGGCTTTGGCTGAGGCTTGTGGTGTGGCCGTGCAATCTATTGTGACTGTTGGTGGTATAGGAGGAGTGGCTACTGCTTTCGCTGCCAGGGACATTCTTGGCAATGTGTTCAGCGGTCTATCGATGCAGTTTTCAAAGCCCTTTTCAATTGGAGATACAATAAAAGCTGGCTCTATAGAGGGTCAAGTGGTGGAAGTGGGTCTTACTACCACATCATTGCTGAGTTCGGAGAAGTTCCCAGTCATTGTGCCAAACTCATTTTTTTCTAGCCAGGTTATTGTGAACAAGTCACGTGCTGAATATCGTGCCATTATTACCAAAATTCCGCTGCAAACCGAGGATTTAAGTAAGATTCCCCAGATATCAGATGATGTGAAAAACATGCTCAGATCAAATGCAAAGGTTTTCTTAGGGAAAGATGTTGCCTACTGTTTCTTATCCCGTATAGAAAGTTCATACGCAGAATTGACTCTTGGATACAACCTAAAAAATATGCGCAGAGATGAATTATACTCTGCAGAACAAGATATTCTCCTGCAGGCAGTTCAAATCATTAAGAATCACGGGGTTGCTCTTGGCAGCACATGGCAAGACACGTCTTCTAAATGA 1620 0.4247 MAAVRSSSVRRLGSTIKGSFNMELVQDCHYHHSVFMNLARLPSDSLNYPYYKRDLQFAKNQFSNLASESLGSSHHFGTRANVSVNPRFSSYCFRSALPFASTSHVLNGRMYSSSVGDKGSRDGGTEVAAGSGASDMNTAGDSVVAGDWAERIKDAWKSVAEAASYAGDKVKETSDDLTPYAQQLLDSHPYLDKVVIPVGGTLTATILAWFLLPRILRKFHKYAMQGPVSLLPGSISGDLVPYEKSFWGAMEDPVRYLVTFIAFSQIGVMVAPTTITSEYLAPVWRGAVIVSFVWFLHRWKTNVFARTLSSQSLLGLDREKVLALDKISSIGLFVIGIMALAEACGVAVQSIVTVGGIGGVATAFAARDILGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEVGLTTTSLLSSEKFPVIVPNSFFSSQVIVNKSRAEYRAIITKIPLQTEDLSKIPQISDDVKNMLRSNAKVFLGKDVAYCFLSRIESSYAELTLGYNLKNMRRDELYSAEQDILLQAVQIIKNHGVALGSTWQDTSSK 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00792 539 Gene3D - 279 383 - -
Pumo7g00792 539 Gene3D - 384 432 IPR023408 -
Pumo7g00792 539 MobiDBLite consensus disorder prediction 114 134 - -
Pumo7g00792 539 SUPERFAMILY Sm-like ribonucleoproteins 368 433 IPR010920 -
Pumo7g00792 539 Pfam Mechanosensitive ion channel 326 528 IPR006685 GO:0016020|GO:0055085
Pumo7g00792 539 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 281 367 IPR011014 GO:0016020
Pumo7g00792 539 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 148 532 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00792 96 537 Mechanosensitive Ion Channel Family AT4G00290 61.312 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00792 K22047 - gmx:100789047 969.533