Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00778 ATGCCACCACCACTCATTCTCTATATACGACGCCGCTTTCGTGGACACAGAGCTCTCAAAGCGCACCTCCATCTTCGGGCTCCGCCTCTGGGTCGTCATCGGCATCCTCGTCGGATCCCTCATCGTCATCACCCTCTTCCTCCTCTCCCTCTGCCTCACCTCCCGCCGCCGCCACCACCACCATCACCACAAGCACCGCCGCACCACCTCCGCCGTCCCCTCTCCCCCCATCTCCAAGGAAATCCTCGAGATCGTCCACGTCCCCCCGCCCCCCGCCACCGTCCACCTCCCCCCGCCGAAGCCCGACCACCCCGCTCCGCCCTCTACTCGAGCGGCGAGAGCAGAGCAACCGTTAGCGTCTGCGAAACGGCGTCGTCGCTGGGCAGCGGGAGTGTGGGCCCCGAAGTGTCGCATCTCGGGTGGGGGAGGTGGTACACGCTCCGAGAACTCGAAGCTGCAACTAATGGCTTGTGTGAAGAGAACGTCATTGGTGAAGGTGGCTATGGAATCGTGTATCGTGGGTTGTTACCTGATGGCACCAAAGTTGCTGTTAAGAACCTTTTGAATAACAAGATGCTTGTGTATGAATATGTTGACAATGGGAATCTAGAACAGTGGCTGCATGGGGATGTTGGACTTGTAAGCCCTATGACATGGGATATCCGAATGAACATTATATTGGGCACGGCAAAAGGGTACTGTATTCATGGTCTAGCAGGCATACACTGTTATGTTGCACCAGAGTATGCGTGCACTGGAATGCTGACTGAGAAGAGTGACGTGTATAGTTTCGGGATACTTATCATGGAAATAATTACTGGAAGAAGTCCTGTTGATTATAGTAAACCACAAGGAGAGGTTAATTTAATAGAGTGGTTGAAAAGTATGGTTGGGAATCGAAAATCCGAGGAAGTAGTTGATCCGAAGATTGCTGAAAAGCCGTCTTCAAAGGCTCTTAAACGGGCTCTGTTGGTTGCTCTTCGATGTGTCGACCCTGATTCGGCAAAGCGGCCTAAAATAGGACATGTGATCCACATGCTCGAGGCTGAGGACCTCTTATTCCGTGATGATCGAAGGAGTGGAGGAGAATCTTCCCGTTCCCATCGCGATTATCAACTAGAGCATAAGGACTCAAGATTAGATAAAAGGCAGAATGGTGCAGAGATCACTGATCAAAGCGAAGCTGATAGTACTAGTAGTAGATATCACCCTCAGCCCAGTAGATGGAGATAA 1233 0.5207 MPPPLILYIRRRFRGHRALKAHLHLRAPPLGRHRHPRRIPHRHHPLPPLPLPHLPPPPPPPSPQAPPHHLRRPLSPHLQGNPRDRPRPPAPRHRPPPPAEARPPRSALYSSGESRATVSVCETASSLGSGSVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGLLPDGTKVAVKNLLNNKMLVYEYVDNGNLEQWLHGDVGLVSPMTWDIRMNIILGTAKGYCIHGLAGIHCYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSKPQGEVNLIEWLKSMVGNRKSEEVVDPKIAEKPSSKALKRALLVALRCVDPDSAKRPKIGHVIHMLEAEDLLFRDDRRSGGESSRSHRDYQLEHKDSRLDKRQNGAEITDQSEADSTSSRYHPQPSRWR 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00778 410 FunFam Putative receptor-like serine/threonine-protein kinase 232 362 - -
Pumo7g00778 410 Pfam Protein tyrosine and serine/threonine kinase 243 346 IPR001245 GO:0004672|GO:0006468
Pumo7g00778 410 MobiDBLite consensus disorder prediction 358 410 - -
Pumo7g00778 410 PANTHER OS01G0323000 PROTEIN 123 191 - -
Pumo7g00778 410 SUPERFAMILY Protein kinase-like (PK-like) 141 348 IPR011009 -
Pumo7g00778 410 Gene3D Transferase(Phosphotransferase) domain 1 233 359 - -
Pumo7g00778 410 MobiDBLite consensus disorder prediction 390 410 - -
Pumo7g00778 410 MobiDBLite consensus disorder prediction 24 44 - -
Pumo7g00778 410 MobiDBLite consensus disorder prediction 24 115 - -
Pumo7g00778 410 Gene3D Phosphorylase Kinase; domain 1 132 198 - -
Pumo7g00778 410 MobiDBLite consensus disorder prediction 45 70 - -
Pumo7g00778 410 ProSitePatterns Protein kinases ATP-binding region signature. 163 185 IPR017441 GO:0005524
Pumo7g00778 410 MobiDBLite consensus disorder prediction 358 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00778 Pumo-Chr7 13787660 13790621 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00778 126 348 Receptor kinase-like Gene Family AT4G02010 32.792 5.18e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pumo7g00778 PK_Tyr_Ser-Thr 7.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00778 - - gmx:100777348 500.36