Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g00776 ATGCCCGAACATGAAAACGCAAGTCAGGAAATCCTCGAGATCGTCCACGTCCCCCCGTCGCCTGCCACCGTCCACCTCCCCCCTCCGCCGCCGAAGCCCGACCACCCCCGCTCCGCCCTCTACTCCAGCGGCGAGAGCAGAGCAACCGTTAGCGTCTGCGAAACGGCGTCGTCTCTCGGCAGCGGGAGTGTGGGCCCCGAAGTGTCGCATCTCGGGTGGCGGAGGTGGTACACGCTCGGAGAACTCGAAGCTGCAACTAATGGCTTGTGTGAAGAGAACGTCATTGGAGAAGGTGGCTACGGAATCGTGTATCGTGGGTTGTTACCTGATGGCACCAAAGTTGCTGTTAAGAACCTTTTGAATAACAAGGGCCAAGCTGAGAGAGAATTTAAAGTTGAGGTAGAAGCTATTGGTCGTGTGCGGCACAAGAATTTTGTTAGGTTGCTTGGATACTGTGTTGAGGGGGCATACAGAACAGTGGCTGCATGGGGATGTTGGACCTGTAAGCCCTCTGACATGGGATATCCGAATGAACATTATATTGGGCACGGCAAAAGGGTTTCTGATTTTGGGCTTGCTAAGCTTTTGTCTGCTGATCATAGTTATGTCACTACTCGAGTGATGGGGACATTTGGTTATGTTGCACCAGAGTATGCATGCACTGGAATGCTGACTGAGAAGAGTGATGTGTATAGTTTCGGGATACTTATCATGGAAATAATTACTGGAAGAAGTCCTGTTGATTATAGTAAACCACAAGGAGAGTGGTTGAAAAGTATGGTTGGGAATCGAAAATCCAAGGAAGTAGTTGATCCGAAGATTGCTGAAAAGCCATCTTCAAAGGCTCTTAAACAGGCTCTGTTGGTTGCTCTTCGATGTGTCAACCCTGATTTGGCAAAGAGGCCTAAAATAGGACATGTGATCCACATGCTCGAGGCTGAGGACCTCTTATTCCGTTGTGTGTTCTTCTCCCTTCTCAAACTTTACATTTTAGTTGACTGA 1002 0.494 MPEHENASQEILEIVHVPPSPATVHLPPPPPKPDHPRSALYSSGESRATVSVCETASSLGSGSVGPEVSHLGWRRWYTLGELEAATNGLCEENVIGEGGYGIVYRGLLPDGTKVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNFVRLLGYCVEGAYRTVAAWGCWTCKPSDMGYPNEHYIGHGKRVSDFGLAKLLSADHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSKPQGEWLKSMVGNRKSKEVVDPKIAEKPSSKALKQALLVALRCVNPDLAKRPKIGHVIHMLEAEDLLFRCVFFSLLKLYILVD 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g00776 333 Gene3D Phosphorylase Kinase; domain 1 67 160 - -
Pumo7g00776 333 MobiDBLite consensus disorder prediction 19 44 - -
Pumo7g00776 333 Gene3D Transferase(Phosphotransferase) domain 1 167 317 - -
Pumo7g00776 333 MobiDBLite consensus disorder prediction 21 36 - -
Pumo7g00776 333 FunFam Probable serine/threonine-protein kinase At1g01540 69 162 - -
Pumo7g00776 333 Pfam Protein kinase domain 186 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00776 333 SUPERFAMILY Protein kinase-like (PK-like) 84 312 IPR011009 -
Pumo7g00776 333 PANTHER OS01G0323000 PROTEIN 186 318 - -
Pumo7g00776 333 Pfam Protein tyrosine and serine/threonine kinase 92 156 IPR001245 GO:0004672|GO:0006468
Pumo7g00776 333 ProSiteProfiles Protein kinase domain profile. 1 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo7g00776 333 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
Pumo7g00776 333 FunFam Putative receptor-like serine/threonine-protein kinase 181 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g00776 Pumo-Chr7 13694792 13700647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g00776 38 331 Trihelix Transcription Factor Family AT1G68690 33.807 2.45e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pumo7g00776 Pkinase 7.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g00776 - - lang:109330952 417.927